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Chlorine in PDB 8s5a: The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna

Enzymatic activity of The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna

All present enzymatic activity of The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna:
3.1.4.1;

Protein crystallography data

The structure of The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna, PDB code: 8s5a was solved by E.Costanzi, M.Thomsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.40 / 2.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 91.626, 100.547, 112.879, 90, 90, 90
R / Rfree (%) 23.4 / 27.3

Other elements in 8s5a:

The structure of The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna (pdb code 8s5a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna, PDB code: 8s5a:

Chlorine binding site 1 out of 1 in 8s5a

Go back to Chlorine Binding Sites List in 8s5a
Chlorine binding site 1 out of 1 in the The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl101

b:116.8
occ:1.00
 N1 C:DG1 3.4 116.4 1.0
O4' B:DA10 3.5 107.9 1.0
O6 C:DG1 3.6 114.0 1.0
C8 B:DA10 3.7 103.3 1.0
C6 C:DG1 4.0 114.5 1.0
C2 B:DT9 4.0 85.5 1.0
N9 B:DA10 4.0 106.5 1.0
C1' B:DA10 4.1 107.5 1.0
N3 B:DT9 4.2 85.7 1.0
N1 B:DT9 4.2 86.1 1.0
O2 B:DT9 4.2 86.0 1.0
N7 B:DA10 4.4 97.9 1.0
C2 C:DG1 4.5 114.8 1.0
N2 C:DG1 4.5 116.3 1.0
C4 B:DT9 4.6 84.5 1.0
C6 B:DT9 4.6 87.8 1.0
C4' B:DA10 4.6 103.6 1.0
C2' B:DT9 4.7 93.5 1.0
C1' B:DT9 4.7 88.7 1.0
C5 B:DT9 4.8 81.4 1.0
C4 B:DA10 4.9 103.8 1.0
N1 C:DA2 4.9 91.7 1.0

Reference:

E.Costanzi, M.Thomsen. The Crystal Structure of FAN1 Nuclease Bound to 5' Phosphorylated P(Dg)/3'(Dt-Dt-Dt-Dt) Double Flap Dna To Be Published.
Page generated: Sun Jul 13 14:03:24 2025

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