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Chlorine in PDB 8s9q: Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H Mutant Complexed with STP03-0404

Protein crystallography data

The structure of Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H Mutant Complexed with STP03-0404, PDB code: 8s9q was solved by T.Dinh, M.Kvaratskhelia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.59 / 2.26
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.991, 71.991, 65.92, 90, 90, 120
R / Rfree (%) 25.5 / 29.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H Mutant Complexed with STP03-0404 (pdb code 8s9q). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H Mutant Complexed with STP03-0404, PDB code: 8s9q:

Chlorine binding site 1 out of 1 in 8s9q

Go back to Chlorine Binding Sites List in 8s9q
Chlorine binding site 1 out of 1 in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H Mutant Complexed with STP03-0404


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H Mutant Complexed with STP03-0404 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:38.6
occ:0.91
CLA A:WBV301 0.0 38.6 0.9
CAV A:WBV301 1.9 25.3 0.9
HE3 A:MET178 2.8 47.4 1.0
CAL A:WBV301 2.9 29.6 0.9
CAK A:WBV301 2.9 32.4 0.9
H23 A:WBV301 3.0 35.8 0.9
H22 A:WBV301 3.0 39.2 0.9
HE1 A:MET178 3.5 47.4 1.0
CE A:MET178 3.6 39.3 1.0
HE2 A:MET178 4.0 47.4 1.0
CAN A:WBV301 4.2 30.0 0.9
CAM A:WBV301 4.2 31.7 0.9
O A:HOH437 4.4 45.6 1.0
CBA A:WBV301 4.8 30.8 0.9
HG2 A:MET178 4.8 40.6 1.0
HG3 A:MET178 4.8 40.6 1.0
SD A:MET178 5.0 37.8 1.0

Reference:

T.Dinh, M.Kvaratskhelia. Hiv-1 Integrase Catalytic Core Domain Complexed with Stp-0404 To Be Published.
Page generated: Sun Jul 13 14:04:32 2025

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