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Chlorine in PDB 8so8: Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa

Protein crystallography data

The structure of Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa, PDB code: 8so8 was solved by G.X.Shaw, S.Kakar, X.Ji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.87 / 2.61
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 122.421, 122.421, 187.795, 90, 90, 90
R / Rfree (%) 22.4 / 27.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa (pdb code 8so8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa, PDB code: 8so8:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 8so8

Go back to Chlorine Binding Sites List in 8so8
Chlorine binding site 1 out of 5 in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1011

b:86.5
occ:1.00
N A:LYS828 3.6 55.2 1.0
CA A:PRO827 3.7 70.4 1.0
CB A:PRO827 3.9 74.2 1.0
C A:PRO827 4.1 59.8 1.0
CB A:LYS828 4.5 45.6 1.0
CA A:LYS828 4.7 56.8 1.0
N A:PRO827 5.0 71.4 1.0

Chlorine binding site 2 out of 5 in 8so8

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Chlorine binding site 2 out of 5 in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1012

b:92.4
occ:1.00
OE2 A:GLU209 2.9 105.3 1.0
OG1 A:THR210 3.4 83.5 1.0
CD A:GLU209 3.9 113.5 1.0
CB A:PRO208 4.0 64.5 1.0
CG2 A:THR210 4.1 82.9 1.0
CG A:GLU209 4.1 108.8 1.0
N A:THR210 4.3 67.5 1.0
N A:GLU209 4.3 75.1 1.0
CB A:THR210 4.3 80.6 1.0
CA A:PRO208 4.6 67.9 1.0
C A:PRO208 4.6 74.1 1.0
CA A:THR210 5.0 75.7 1.0
OE1 A:GLU209 5.0 99.0 1.0

Chlorine binding site 3 out of 5 in 8so8

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Chlorine binding site 3 out of 5 in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1013

b:84.3
occ:1.00
O A:HOH1195 3.1 71.6 1.0
O A:ASP280 3.4 53.3 1.0
CD A:PRO208 3.9 62.0 1.0
CG A:PRO208 4.0 68.4 1.0
O A:GLU281 4.1 73.7 1.0
CD2 A:LEU256 4.4 71.7 1.0
CB A:LEU256 4.4 62.9 1.0
CG1 A:VAL279 4.5 42.7 1.0
N A:PRO208 4.5 57.0 1.0
CG2 A:ILE206 4.6 60.9 1.0
C A:ASP280 4.7 54.5 1.0
C A:GLU281 4.8 70.6 1.0
O A:ILE206 4.9 48.5 1.0

Chlorine binding site 4 out of 5 in 8so8

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Chlorine binding site 4 out of 5 in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1014

b:89.0
occ:1.00
CB A:HIS634 3.8 64.0 1.0
N A:CYS636 4.0 53.0 1.0
CE A:LYS678 4.1 72.2 1.0
N A:THR635 4.1 66.7 1.0
CB A:CYS636 4.1 80.2 1.0
CG A:HIS634 4.3 70.7 1.0
CD2 A:HIS634 4.3 66.8 1.0
CA A:CYS636 4.5 59.3 1.0
CG2 A:THR635 4.5 60.6 1.0
CA A:HIS634 4.7 65.8 1.0
NZ A:LYS678 4.7 88.7 1.0
C A:THR635 4.8 58.3 1.0
C A:HIS634 4.8 66.1 1.0
CA A:THR635 4.9 59.0 1.0
O A:HOH1205 5.0 60.2 1.0

Chlorine binding site 5 out of 5 in 8so8

Go back to Chlorine Binding Sites List in 8so8
Chlorine binding site 5 out of 5 in the Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1015

b:92.8
occ:1.00
NH2 A:ARG131 3.5 88.2 1.0
ND2 A:ASN862 3.8 85.1 1.0
CB A:ALA127 3.8 67.1 1.0
CB A:ASP124 3.8 90.7 1.0
CA A:ASP124 3.9 91.6 1.0
O A:ASP124 4.5 98.6 1.0
O A:MET123 4.7 91.3 1.0
C A:ASP124 4.7 93.5 1.0
N A:ASP124 4.8 93.6 1.0
CZ A:ARG131 4.9 90.9 1.0
CG A:ASN862 4.9 87.6 1.0

Reference:

G.X.Shaw, S.Kakar, X.Ji. Crystal Structure of An N-Terminally Truncated Variant of Escherichia Coli Rapa To Be Published.
Page generated: Sun Jul 13 14:13:26 2025

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