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Chlorine in PDB 8t5a: Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with STP03-0404

Protein crystallography data

The structure of Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with STP03-0404, PDB code: 8t5a was solved by T.Dinh, M.Kvaratskhelia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.28 / 1.93
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.847, 71.847, 66.025, 90, 90, 120
R / Rfree (%) 25 / 28

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with STP03-0404 (pdb code 8t5a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with STP03-0404, PDB code: 8t5a:

Chlorine binding site 1 out of 1 in 8t5a

Go back to Chlorine Binding Sites List in 8t5a
Chlorine binding site 1 out of 1 in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with STP03-0404


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with STP03-0404 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:20.5
occ:1.00
CLA A:WBV301 0.0 20.5 1.0
CAV A:WBV301 1.8 16.4 1.0
CAL A:WBV301 2.8 21.8 1.0
CAK A:WBV301 2.8 20.7 1.0
H23 A:WBV301 2.9 26.4 1.0
H22 A:WBV301 3.0 25.1 1.0
CAN A:WBV301 4.1 27.0 1.0
CAM A:WBV301 4.1 24.7 1.0
HE3 A:MET178 4.6 50.3 1.0
CBA A:WBV301 4.6 21.6 1.0
SD A:MET178 4.9 28.3 1.0
HG2 A:MET178 4.9 23.3 1.0
H25 A:WBV301 5.0 32.7 1.0

Reference:

T.Dinh, M.Kvaratskhelia. Hiv-1 Integrase Catalytic Core Domain (Ccd) Y99H/A128T Mutant Complexed with Bkc-110 To Be Published.
Page generated: Sun Jul 13 14:21:53 2025

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