Atomistry » Chlorine » PDB 8ux6-8vev » 8v4g
Atomistry »
  Chlorine »
    PDB 8ux6-8vev »
      8v4g »

Chlorine in PDB 8v4g: X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp

Protein crystallography data

The structure of X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp, PDB code: 8v4g was solved by M.E.Schumann, J.B.Thoden, H.M.Holden, F.M.Raushel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.05 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.354, 102.44, 141.695, 90, 90, 90
R / Rfree (%) 19.1 / 25.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp (pdb code 8v4g). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp, PDB code: 8v4g:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8v4g

Go back to Chlorine Binding Sites List in 8v4g
Chlorine binding site 1 out of 2 in the X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:47.3
occ:1.00
N A:GLU79 3.4 29.6 1.0
N A:ASP80 3.6 31.9 1.0
CG A:LYS83 4.0 57.6 1.0
CB A:ASP80 4.1 33.5 1.0
CA A:GLU79 4.1 31.4 1.0
CB A:GLU79 4.1 33.9 1.0
CA A:TYR78 4.2 32.7 1.0
CB A:LYS83 4.2 55.8 1.0
C A:GLU79 4.2 30.4 1.0
CD1 A:TYR78 4.3 38.6 1.0
CB A:TYR78 4.3 33.3 1.0
C A:TYR78 4.3 31.0 1.0
CA A:ASP80 4.4 33.5 1.0
O A:ASP80 4.5 32.4 1.0
O A:HOH616 4.6 44.9 1.0
CG A:TYR78 4.7 36.1 1.0
C A:ASP80 4.9 30.7 1.0

Chlorine binding site 2 out of 2 in 8v4g

Go back to Chlorine Binding Sites List in 8v4g
Chlorine binding site 2 out of 2 in the X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Structure of the Nadp-Dependent Reductase From Campylobacter Jejuni Responsible For the Synthesis of Cdp-Glucitol in the Presence of Cdp and Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl403

b:27.6
occ:1.00
NZ A:LYS184 3.2 23.5 1.0
CA B:ASN106 3.3 18.3 1.0
N B:ILE108 3.3 15.3 1.0
CB B:ILE108 3.3 18.5 0.5
CB B:ILE108 3.3 17.9 0.5
N B:ASP109 3.4 16.4 1.0
C B:ASN106 3.4 15.7 1.0
CA B:ILE108 3.7 16.3 0.5
CA B:ILE108 3.7 16.1 0.5
CB B:ASN106 3.7 21.8 1.0
CG B:ASP109 3.8 23.9 1.0
OD1 B:ASP109 3.8 25.0 1.0
N B:PRO107 3.8 16.0 1.0
O B:ASN106 3.8 14.1 1.0
ND2 B:ASN106 3.8 28.5 1.0
CG1 B:ILE108 3.9 18.3 0.5
CD1 B:ILE108 3.9 17.8 0.5
CD A:LYS184 4.0 23.6 1.0
CD B:PRO107 4.0 17.2 1.0
CG1 B:ILE108 4.0 19.6 0.5
C B:ILE108 4.0 15.8 1.0
OD2 B:ASP109 4.1 33.1 1.0
CB B:ASP109 4.1 18.2 1.0
CE A:LYS184 4.2 23.5 1.0
CG B:ASN106 4.2 24.2 1.0
C B:PRO107 4.3 14.6 1.0
CA B:ASP109 4.3 14.3 1.0
CG2 B:ILE108 4.4 18.2 0.5
O B:GLU105 4.4 16.5 1.0
CG2 B:ILE108 4.5 17.9 0.5
N B:ASN106 4.6 20.0 1.0
CA B:PRO107 4.7 15.1 1.0
OH A:TYR185 4.7 32.5 1.0
CG B:PRO107 4.7 15.6 1.0
C B:GLU105 4.9 20.0 1.0

Reference:

M.K.Ghosh, J.B.Thoden, M.E.Schumann, H.M.Holden, F.M.Raushel. Biosynthesis of Cdp-D-Glucitol For the Capsular Polysaccharides of Campylobacter Jejuni To Be Published.
Page generated: Sun Jul 13 15:10:23 2025

Last articles

Fe in 2FJD
Fe in 2FJB
Fe in 2FJA
Fe in 2FJC
Fe in 2FGO
Fe in 2FIY
Fe in 2FFN
Fe in 2FDN
Fe in 2FDY
Fe in 2FDW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy