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Chlorine in PDB 8wzt: Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt.

Enzymatic activity of Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt.

All present enzymatic activity of Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt.:
3.2.1.17;

Protein crystallography data

The structure of Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt., PDB code: 8wzt was solved by B.Maity, M.Shoji, F.Luo, T.Nakane, S.Abe, S.Owada, J.Kang, K.Tono, R.Tanaka, T.T.Thuc, M.Kojima, Y.Hishikawa, J.Tanaka, J.Tian, H.Noya, Y.Nakasuji, A.Asanuma, X.Yao, S.Iwata, Y.Shigeta, E.Nango, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.69 / 1.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 81.7, 81.7, 37.9, 90, 90, 90
R / Rfree (%) 19.3 / 21.2

Other elements in 8wzt:

The structure of Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt. also contains other interesting chemical elements:

Manganese (Mn) 1 atom
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt. (pdb code 8wzt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt., PDB code: 8wzt:

Chlorine binding site 1 out of 1 in 8wzt

Go back to Chlorine Binding Sites List in 8wzt
Chlorine binding site 1 out of 1 in the Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sfx Structure of An Mn-Carbonyl Complex Immobilized in Hen Egg White Lysozyme Microcrystals, 1 Microsecond After Photoexcitation at Rt. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:37.8
occ:1.00
OH A:TYR23 2.9 27.6 1.0
O A:HOH310 3.5 37.8 1.0
CZ A:TYR23 3.7 26.4 1.0
CE2 A:TYR23 3.7 27.1 1.0
CA A:GLY104 4.2 28.3 1.0
O A:ARG21 4.6 38.0 1.0
N A:GLY104 4.8 29.1 1.0
CE1 A:TYR23 4.9 26.4 1.0
CD2 A:TYR23 5.0 26.2 1.0
O A:HOH318 5.0 43.6 1.0

Reference:

B.Maity, M.Shoji, F.Luo, T.Nakane, S.Abe, S.Owada, J.Kang, K.Tono, R.Tanaka, T.T.Pham, M.Kojima, Y.Hishikawa, J.Tanaka, J.Tian, M.Nagama, T.Suzuki, H.Noya, Y.Nakasuji, A.Asanuma, X.Yao, S.Iwata, Y.Shigeta, E.Nango, T.Ueno. Real-Time Observation of A Metal Complex-Driven Reaction Intermediate Using A Porous Protein Crystal and Serial Femtosecond Crystallography. Nat Commun V. 15 5518 2024.
ISSN: ESSN 2041-1723
PubMed: 38951539
DOI: 10.1038/S41467-024-49814-9
Page generated: Sun Jul 13 15:38:11 2025

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