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Chlorine in PDB 8z2y: High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose

Enzymatic activity of High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose

All present enzymatic activity of High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose:
3.2.1.58;

Protein crystallography data

The structure of High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose, PDB code: 8z2y was solved by B.Banerjee, C.K.Kamale, A.B.Suryawanshi, P.Bhaumik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.53 / 1.20
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 81.29, 81.29, 114.74, 90, 90, 120
R / Rfree (%) 16.1 / 18.5

Other elements in 8z2y:

The structure of High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose (pdb code 8z2y). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose, PDB code: 8z2y:

Chlorine binding site 1 out of 1 in 8z2y

Go back to Chlorine Binding Sites List in 8z2y
Chlorine binding site 1 out of 1 in the High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl506

b:36.2
occ:1.00
 O A:HOH696 2.6 23.6 1.0
O A:LEU238 2.8 8.5 1.0
O A:HOH969 3.0 29.9 1.0
OD2 A:ASP235 3.0 9.1 1.0
O A:HOH965 3.1 35.5 1.0
HA A:PHE237 3.4 8.1 1.0
O A:HOH869 3.4 14.5 1.0
CG A:ASP235 3.5 7.4 1.0
HA A:PRO239 3.5 8.3 1.0
C A:LEU238 3.6 7.8 1.0
OD1 A:ASP235 3.6 8.2 1.0
OG1 A:THR257 3.7 9.6 1.0
C A:PHE237 3.8 8.4 1.0
HG1 A:THR257 3.8 9.9 0.0
O A:HOH798 3.9 21.4 1.0
O A:PHE237 3.9 11.1 1.0
O A:HOH677 4.0 11.4 1.0
H A:VAL240 4.0 7.4 1.0
CA A:PHE237 4.1 8.1 1.0
CA A:PRO239 4.1 8.3 1.0
N A:PRO239 4.1 8.7 1.0
O A:HOH957 4.2 25.0 1.0
N A:LEU238 4.2 7.7 1.0
N A:VAL240 4.4 7.6 1.0
H A:PHE237 4.4 7.7 1.0
HB2 A:ASP235 4.5 7.1 1.0
CA A:LEU238 4.5 8.0 1.0
C A:PRO239 4.5 7.4 1.0
HB A:VAL240 4.6 7.6 1.0
H A:LEU238 4.6 7.9 1.0
CB A:ASP235 4.6 7.2 1.0
N A:PHE237 4.7 7.8 1.0
HE1 A:PHE282 4.7 12.1 1.0
HA A:LEU238 4.9 8.0 1.0
H A:HIS258 4.9 7.1 1.0
CB A:THR257 5.0 8.1 1.0

Reference:

B.Banerjee, C.K.Kamale, A.B.Suryawanshi, S.Dasgupta, S.Noronha, P.Bhaumik. Crystal Structures of Aspergillus Oryzae Exo-Beta-(1,3)-Glucanase Reveal Insights Into Oligosaccharide Binding, Recognition, and Hydrolysis. Febs Lett. 2024.
ISSN: ISSN 0014-5793
PubMed: 39448541
DOI: 10.1002/1873-3468.15045
Page generated: Sun Jul 13 15:49:21 2025

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