Chlorine in PDB 8zpu: Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound

The structure of Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound, PDB code: 8zpu was solved by J.M.M.Caaveiro, R.Kawade, K.Tsumoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	21.10 / 2.80
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	126.61, 126.61, 82.36, 90, 90, 120
R / Rfree (%)	30.4 / 34.5

The binding sites of Chlorine atom in the Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound (pdb code 8zpu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound, PDB code: 8zpu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl304 b:54.9 occ:1.00 NH2 A:ARG9 3.3 49.7 1.0 N A:THR18 4.0 42.7 1.0 CA A:LEU17 4.5 44.3 1.0 CB A:THR18 4.5 42.6 1.0 CZ A:ARG9 4.6 48.7 1.0 C A:LEU17 4.7 42.6 1.0 O A:PRO16 4.7 48.0 1.0 O A:THR18 4.8 42.8 1.0 CA A:THR18 4.8 42.5 1.0 OG1 A:THR18 4.8 43.1 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Anti-Phosphorylated Peptide C7 Scfv Antibody with Peptide Bound within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl304 b:21.9 occ:0.50 NH2 B:ARG197 3.2 35.4 1.0 OD1 B:ASP217 3.7 39.7 1.0 CG B:PRO195 4.0 31.4 1.0 NH1 B:ARG197 4.0 34.9 1.0 CZ B:ARG197 4.0 34.8 1.0 CB B:PRO195 4.6 32.5 1.0 CG B:ASP217 4.7 37.4 1.0 OD2 B:ASP217 5.0 37.0 1.0

K.Kasahara, R.Kawade, M.Nakakido, R.Matsunaga, H.Akiba, K.C.Entzminger, T.Maruyama, S.C.J.Okumura, J.M.M.Caaveiro, D.Kuroda, K.Tsumoto. Origin of High Binding Affinity and Selectivity of Phosphorylated Epitope-Specific Rabbit Antibodies To Be Published.