Chlorine in PDB 8zsu: Lysozyme Crystallized with Bioassembler in Space Microgravity
Enzymatic activity of Lysozyme Crystallized with Bioassembler in Space Microgravity
All present enzymatic activity of Lysozyme Crystallized with Bioassembler in Space Microgravity:
3.2.1.17;
Protein crystallography data
The structure of Lysozyme Crystallized with Bioassembler in Space Microgravity, PDB code: 8zsu
was solved by
C.Maccarthy,
E.V.Koudan,
S.V.Petrov,
A.A.Levin,
Y.D.Khesuani,
V.Borshchevskiy,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
27.45 /
1.09
|
|
Space group
|
P 43 21 2
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
77.21,
77.21,
39.05,
90,
90,
90
|
|
R / Rfree (%)
|
12.3 /
14.3
|
Other elements in 8zsu:
The structure of Lysozyme Crystallized with Bioassembler in Space Microgravity also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Lysozyme Crystallized with Bioassembler in Space Microgravity
(pdb code 8zsu). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the
Lysozyme Crystallized with Bioassembler in Space Microgravity, PDB code: 8zsu:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
Chlorine binding site 1 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 1 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1006
b:42.6
occ:0.89
|
HE1
|
A:TRP63
|
2.2
|
16.9
|
1.0
|
|
HD21
|
A:ASN59
|
2.5
|
18.9
|
0.4
|
|
O1
|
A:NO31005
|
2.7
|
23.5
|
0.7
|
|
O
|
A:HOH1190
|
2.8
|
39.2
|
0.8
|
|
NE1
|
A:TRP63
|
3.0
|
14.1
|
1.0
|
|
HD1
|
A:TRP62
|
3.1
|
24.4
|
1.0
|
|
ND2
|
A:ASN59
|
3.2
|
15.7
|
0.4
|
|
O
|
A:HOH1105
|
3.3
|
38.2
|
1.0
|
|
HD22
|
A:ASN59
|
3.3
|
18.9
|
0.4
|
|
O
|
A:HOH1269
|
3.5
|
35.7
|
1.0
|
|
N
|
A:NO31005
|
3.5
|
21.9
|
0.7
|
|
O
|
A:HOH1122
|
3.6
|
34.0
|
1.0
|
|
O2
|
A:NO31005
|
3.7
|
16.6
|
0.7
|
|
HZ2
|
A:TRP63
|
3.7
|
18.0
|
1.0
|
|
HC62
|
A:DO31002
|
3.8
|
22.1
|
0.7
|
|
HB1
|
A:ALA107
|
3.9
|
17.5
|
1.0
|
|
CD1
|
A:TRP62
|
3.9
|
20.3
|
1.0
|
|
CE2
|
A:TRP63
|
4.0
|
13.9
|
1.0
|
|
O
|
A:HOH1174
|
4.0
|
37.0
|
0.8
|
|
CD1
|
A:TRP63
|
4.0
|
13.5
|
1.0
|
|
HD1
|
A:TRP63
|
4.1
|
16.2
|
1.0
|
|
CZ2
|
A:TRP63
|
4.2
|
15.0
|
1.0
|
|
HG23
|
A:ILE98
|
4.2
|
16.7
|
1.0
|
|
HB3
|
A:ASN59
|
4.3
|
17.0
|
0.6
|
|
CG
|
A:ASN59
|
4.4
|
15.1
|
0.4
|
|
HC51
|
A:DO31002
|
4.4
|
21.7
|
0.7
|
|
HE1
|
A:TRP62
|
4.5
|
27.6
|
1.0
|
|
O
|
A:HOH1200
|
4.5
|
31.5
|
0.8
|
|
HG21
|
A:ILE98
|
4.6
|
16.7
|
1.0
|
|
HB2
|
A:TRP62
|
4.6
|
18.1
|
1.0
|
|
C6
|
A:DO31002
|
4.6
|
18.4
|
0.7
|
|
NE1
|
A:TRP62
|
4.6
|
23.0
|
1.0
|
|
HC61
|
A:DO31002
|
4.6
|
22.1
|
0.7
|
|
OD1
|
A:ASN59
|
4.7
|
15.7
|
0.4
|
|
O3
|
A:NO31005
|
4.7
|
24.1
|
0.7
|
|
CB
|
A:ALA107
|
4.8
|
14.6
|
1.0
|
|
HB2
|
A:ALA107
|
4.8
|
17.5
|
1.0
|
|
HC52
|
A:DO31002
|
4.8
|
21.7
|
0.7
|
|
C5
|
A:DO31002
|
4.9
|
18.1
|
0.7
|
|
CG2
|
A:ILE98
|
4.9
|
13.9
|
1.0
|
|
HG12
|
A:ILE98
|
4.9
|
15.3
|
1.0
|
|
CG
|
A:TRP62
|
5.0
|
17.2
|
1.0
|
|
HD13
|
A:ILE98
|
5.0
|
17.0
|
1.0
|
|
HB2
|
A:ASN59
|
5.0
|
17.0
|
0.6
|
|
Chlorine binding site 2 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 2 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1007
b:33.7
occ:0.75
|
H
|
A:ASN74
|
2.4
|
19.5
|
1.0
|
|
HB3
|
A:ARG73
|
2.9
|
22.8
|
0.5
|
|
HB3
|
A:ARG73
|
2.9
|
22.9
|
0.5
|
|
N
|
A:ASN74
|
3.2
|
16.2
|
1.0
|
|
HD23
|
A:LEU75
|
3.3
|
25.8
|
1.0
|
|
HA
|
A:ARG73
|
3.5
|
21.3
|
0.5
|
|
HA
|
A:ARG73
|
3.5
|
21.3
|
0.5
|
|
HD2
|
A:ARG73
|
3.6
|
27.8
|
0.5
|
|
HD3
|
A:ARG73
|
3.6
|
28.5
|
0.5
|
|
C
|
A:ASN74
|
3.7
|
15.6
|
1.0
|
|
CB
|
A:ARG73
|
3.7
|
19.0
|
0.5
|
|
CB
|
A:ARG73
|
3.7
|
19.1
|
0.5
|
|
HB3
|
A:ASN74
|
3.8
|
18.9
|
1.0
|
|
O
|
A:ASN74
|
3.8
|
16.3
|
1.0
|
|
HA
|
A:LEU75
|
3.8
|
18.4
|
1.0
|
|
O
|
A:HOH1184
|
3.9
|
33.8
|
1.0
|
|
CA
|
A:ARG73
|
3.9
|
17.7
|
0.5
|
|
CA
|
A:ARG73
|
4.0
|
17.7
|
0.5
|
|
CA
|
A:ASN74
|
4.0
|
15.6
|
1.0
|
|
HD3
|
A:ARG73
|
4.0
|
27.8
|
0.5
|
|
HG
|
A:LEU75
|
4.0
|
22.4
|
1.0
|
|
C
|
A:ARG73
|
4.1
|
16.1
|
1.0
|
|
N
|
A:LEU75
|
4.2
|
14.9
|
1.0
|
|
CD
|
A:ARG73
|
4.2
|
23.2
|
0.5
|
|
CD2
|
A:LEU75
|
4.2
|
21.5
|
1.0
|
|
CD
|
A:ARG73
|
4.3
|
23.7
|
0.5
|
|
HD21
|
A:LEU75
|
4.3
|
25.8
|
1.0
|
|
HD2
|
A:ARG73
|
4.3
|
28.5
|
0.5
|
|
O
|
A:HOH1290
|
4.4
|
31.5
|
0.5
|
|
CB
|
A:ASN74
|
4.4
|
15.8
|
1.0
|
|
HB2
|
A:ARG73
|
4.4
|
22.8
|
0.5
|
|
CG
|
A:ARG73
|
4.4
|
21.2
|
0.5
|
|
HB2
|
A:ARG73
|
4.4
|
22.9
|
0.5
|
|
HG2
|
A:ARG73
|
4.4
|
25.4
|
0.5
|
|
CA
|
A:LEU75
|
4.5
|
15.3
|
1.0
|
|
CG
|
A:ARG73
|
4.5
|
21.2
|
0.5
|
|
H
|
A:LEU75
|
4.6
|
17.9
|
1.0
|
|
CG
|
A:LEU75
|
4.6
|
18.7
|
1.0
|
|
HA
|
A:ASN74
|
4.9
|
18.7
|
1.0
|
|
O
|
A:HOH1266
|
4.9
|
32.2
|
1.0
|
|
HB2
|
A:ASN74
|
4.9
|
18.9
|
1.0
|
|
HG3
|
A:ARG73
|
4.9
|
25.5
|
0.5
|
|
HD22
|
A:LEU75
|
4.9
|
25.8
|
1.0
|
|
Chlorine binding site 3 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 3 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1009
b:15.8
occ:1.00
|
H
|
A:GLY26
|
2.4
|
12.9
|
1.0
|
|
HG
|
A:SER24
|
2.7
|
17.9
|
1.0
|
|
HA
|
A:GLN121
|
2.8
|
16.2
|
1.0
|
|
O
|
A:HOH1323
|
3.0
|
30.2
|
0.6
|
|
HA3
|
A:GLY26
|
3.0
|
13.3
|
1.0
|
|
HB2
|
A:SER24
|
3.0
|
16.1
|
1.0
|
|
OG
|
A:SER24
|
3.1
|
14.9
|
1.0
|
|
O
|
A:HOH1325
|
3.1
|
39.2
|
1.0
|
|
N
|
A:GLY26
|
3.2
|
10.7
|
1.0
|
|
HG23
|
A:VAL120
|
3.2
|
17.4
|
1.0
|
|
O
|
A:HOH1301
|
3.4
|
24.2
|
1.0
|
|
HB2
|
A:GLN121
|
3.6
|
19.5
|
1.0
|
|
CB
|
A:SER24
|
3.6
|
13.4
|
1.0
|
|
CA
|
A:GLY26
|
3.6
|
11.1
|
1.0
|
|
CA
|
A:GLN121
|
3.6
|
13.5
|
1.0
|
|
HD11
|
A:ILE124
|
3.6
|
27.5
|
1.0
|
|
HG2
|
A:GLN121
|
3.7
|
20.5
|
1.0
|
|
HG12
|
A:ILE124
|
3.7
|
23.5
|
1.0
|
|
HD13
|
A:ILE124
|
3.8
|
27.5
|
1.0
|
|
N
|
A:GLN121
|
3.9
|
13.1
|
1.0
|
|
CB
|
A:GLN121
|
4.0
|
16.2
|
1.0
|
|
CD1
|
A:ILE124
|
4.1
|
22.9
|
1.0
|
|
H
|
A:ASN27
|
4.2
|
12.1
|
1.0
|
|
CG2
|
A:VAL120
|
4.2
|
14.5
|
1.0
|
|
H
|
A:LEU25
|
4.2
|
13.7
|
1.0
|
|
HB3
|
A:SER24
|
4.2
|
16.1
|
1.0
|
|
HA2
|
A:GLY26
|
4.2
|
13.3
|
1.0
|
|
C
|
A:VAL120
|
4.2
|
12.5
|
1.0
|
|
H
|
A:GLN121
|
4.2
|
15.7
|
1.0
|
|
N
|
A:LEU25
|
4.2
|
11.4
|
1.0
|
|
O
|
A:VAL120
|
4.3
|
12.4
|
1.0
|
|
CG
|
A:GLN121
|
4.3
|
17.1
|
1.0
|
|
C
|
A:LEU25
|
4.3
|
10.7
|
1.0
|
|
HB3
|
A:LEU25
|
4.4
|
15.1
|
1.0
|
|
C
|
A:SER24
|
4.4
|
11.7
|
1.0
|
|
HG21
|
A:VAL120
|
4.4
|
17.4
|
1.0
|
|
CG1
|
A:ILE124
|
4.4
|
19.6
|
1.0
|
|
HG3
|
A:GLN121
|
4.5
|
20.5
|
1.0
|
|
C
|
A:GLY26
|
4.6
|
9.8
|
1.0
|
|
CA
|
A:SER24
|
4.6
|
11.6
|
1.0
|
|
N
|
A:ASN27
|
4.7
|
10.1
|
1.0
|
|
HG22
|
A:VAL120
|
4.7
|
17.4
|
1.0
|
|
CA
|
A:LEU25
|
4.7
|
11.7
|
1.0
|
|
HB
|
A:VAL120
|
4.8
|
15.9
|
1.0
|
|
O
|
A:SER24
|
4.8
|
12.1
|
1.0
|
|
C
|
A:GLN121
|
4.8
|
13.1
|
1.0
|
|
HG13
|
A:ILE124
|
4.9
|
23.5
|
1.0
|
|
HB3
|
A:GLN121
|
4.9
|
19.5
|
1.0
|
|
O
|
A:HOH1338
|
4.9
|
35.2
|
0.8
|
|
O
|
A:HOH1330
|
4.9
|
30.4
|
0.7
|
|
O
|
A:HOH1272
|
4.9
|
37.6
|
1.0
|
|
HD22
|
A:ASN27
|
5.0
|
14.3
|
1.0
|
|
HD12
|
A:ILE124
|
5.0
|
27.5
|
1.0
|
|
O
|
A:HOH1157
|
5.0
|
16.8
|
1.0
|
|
CB
|
A:VAL120
|
5.0
|
13.2
|
1.0
|
|
HG23
|
A:ILE124
|
5.0
|
21.9
|
1.0
|
|
Chlorine binding site 4 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 4 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1010
b:17.4
occ:0.76
|
H
|
A:THR69
|
2.4
|
17.4
|
1.0
|
|
O
|
A:HOH1297
|
3.0
|
41.3
|
1.0
|
|
HA2
|
A:GLY67
|
3.1
|
19.7
|
1.0
|
|
H
|
A:GLY67
|
3.1
|
17.4
|
1.0
|
|
O
|
A:HOH1196
|
3.1
|
14.8
|
1.0
|
|
N
|
A:THR69
|
3.3
|
14.5
|
1.0
|
|
O
|
A:HOH1254
|
3.3
|
28.3
|
0.8
|
|
O
|
A:THR69
|
3.4
|
15.4
|
1.0
|
|
H
|
A:ARG68
|
3.4
|
17.4
|
0.5
|
|
H
|
A:ARG68
|
3.5
|
17.4
|
0.5
|
|
O
|
A:HOH1171
|
3.5
|
33.5
|
1.0
|
|
N
|
A:ARG68
|
3.5
|
14.5
|
1.0
|
|
CA
|
A:GLY67
|
3.5
|
16.4
|
1.0
|
|
C
|
A:GLY67
|
3.6
|
16.8
|
1.0
|
|
N
|
A:GLY67
|
3.6
|
14.5
|
1.0
|
|
OD1
|
A:ASN65
|
3.6
|
17.1
|
1.0
|
|
C
|
A:THR69
|
3.6
|
15.7
|
1.0
|
|
HB
|
A:THR69
|
3.7
|
16.7
|
1.0
|
|
OG
|
A:SER72
|
3.8
|
17.1
|
1.0
|
|
CA
|
A:THR69
|
3.9
|
14.8
|
1.0
|
|
HA
|
A:PRO70
|
3.9
|
23.0
|
1.0
|
|
O
|
A:HOH1231
|
4.0
|
17.9
|
1.0
|
|
H
|
A:ASP66
|
4.1
|
14.8
|
1.0
|
|
O
|
A:GLY67
|
4.2
|
20.3
|
1.0
|
|
N
|
A:PRO70
|
4.2
|
17.9
|
1.0
|
|
OD1
|
A:ASP66
|
4.2
|
12.8
|
1.0
|
|
CB
|
A:THR69
|
4.3
|
13.9
|
1.0
|
|
C
|
A:ARG68
|
4.3
|
15.6
|
1.0
|
|
CA
|
A:ARG68
|
4.3
|
15.4
|
0.5
|
|
HA
|
A:ARG68
|
4.4
|
18.4
|
0.5
|
|
CA
|
A:ARG68
|
4.4
|
14.5
|
0.5
|
|
HA3
|
A:GLY67
|
4.5
|
19.7
|
1.0
|
|
HG1
|
A:THR69
|
4.5
|
16.8
|
1.0
|
|
H
|
A:SER72
|
4.5
|
22.2
|
1.0
|
|
CA
|
A:PRO70
|
4.6
|
19.2
|
1.0
|
|
HA
|
A:ARG68
|
4.6
|
17.4
|
0.5
|
|
O
|
A:HOH1203
|
4.6
|
38.1
|
1.0
|
|
C
|
A:ASP66
|
4.7
|
13.6
|
1.0
|
|
O
|
A:HOH1329
|
4.7
|
35.2
|
1.0
|
|
O
|
A:HOH1162
|
4.7
|
28.5
|
1.0
|
|
NA
|
A:NA1008
|
4.8
|
15.2
|
1.0
|
|
CG
|
A:ASN65
|
4.8
|
15.6
|
1.0
|
|
HA
|
A:ASN65
|
4.8
|
15.6
|
1.0
|
|
N
|
A:ASP66
|
4.8
|
12.3
|
1.0
|
|
HA
|
A:THR69
|
4.9
|
17.7
|
1.0
|
|
HD3
|
A:PRO70
|
4.9
|
24.4
|
1.0
|
|
OG1
|
A:THR69
|
4.9
|
14.0
|
1.0
|
|
CB
|
A:SER72
|
5.0
|
16.5
|
1.0
|
|
HB3
|
A:SER72
|
5.0
|
19.8
|
1.0
|
|
Chlorine binding site 5 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 5 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1011
b:24.6
occ:0.77
|
H
|
A:GLU7
|
2.4
|
16.2
|
1.0
|
|
HA3
|
A:GLY4
|
2.8
|
19.4
|
1.0
|
|
O
|
A:HOH1253
|
2.8
|
22.4
|
1.0
|
|
H
|
A:CYS6
|
2.9
|
17.0
|
1.0
|
|
HB2
|
A:GLU7
|
3.0
|
17.7
|
1.0
|
|
O
|
A:HOH1245
|
3.0
|
29.6
|
0.6
|
|
HB2
|
A:CYS6
|
3.1
|
19.4
|
1.0
|
|
N
|
A:GLU7
|
3.1
|
13.5
|
1.0
|
|
N
|
A:CYS6
|
3.4
|
14.2
|
1.0
|
|
CA
|
A:GLY4
|
3.5
|
16.1
|
1.0
|
|
C
|
A:GLY4
|
3.5
|
13.9
|
1.0
|
|
HB3
|
A:GLU7
|
3.7
|
17.7
|
1.0
|
|
CB
|
A:GLU7
|
3.7
|
14.8
|
1.0
|
|
N
|
A:ARG5
|
3.8
|
15.2
|
1.0
|
|
H
|
A:ARG5
|
3.8
|
18.3
|
1.0
|
|
CB
|
A:CYS6
|
3.9
|
16.2
|
1.0
|
|
CA
|
A:CYS6
|
3.9
|
14.2
|
1.0
|
|
C
|
A:CYS6
|
3.9
|
13.5
|
1.0
|
|
CA
|
A:GLU7
|
4.0
|
13.5
|
1.0
|
|
O
|
A:GLY4
|
4.0
|
14.0
|
1.0
|
|
HA2
|
A:GLY4
|
4.2
|
19.4
|
1.0
|
|
H
|
A:GLY4
|
4.2
|
18.2
|
1.0
|
|
C
|
A:ARG5
|
4.3
|
14.2
|
1.0
|
|
O
|
A:HOH1346
|
4.3
|
37.3
|
1.0
|
|
O
|
A:HOH1270
|
4.3
|
17.4
|
0.3
|
|
N
|
A:GLY4
|
4.4
|
15.2
|
1.0
|
|
HA
|
A:GLU7
|
4.4
|
16.2
|
1.0
|
|
HB3
|
A:CYS6
|
4.5
|
19.4
|
1.0
|
|
O
|
A:HOH1350
|
4.5
|
38.4
|
0.5
|
|
CA
|
A:ARG5
|
4.6
|
15.4
|
1.0
|
|
HB3
|
A:ARG5
|
4.7
|
21.8
|
1.0
|
|
HA
|
A:CYS6
|
4.9
|
17.1
|
1.0
|
|
H
|
A:LEU8
|
4.9
|
15.1
|
1.0
|
|
O
|
A:HOH1307
|
4.9
|
36.4
|
1.0
|
|
OE1
|
A:GLU7
|
4.9
|
19.2
|
1.0
|
|
CG
|
A:GLU7
|
5.0
|
16.3
|
1.0
|
|
SG
|
A:CYS6
|
5.0
|
19.2
|
1.0
|
|
Chlorine binding site 6 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 6 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1012
b:15.0
occ:0.55
|
CL
|
A:CL1012
|
0.0
|
15.0
|
0.6
|
|
CL
|
A:CL1012
|
1.1
|
19.2
|
0.5
|
|
O
|
A:HOH1300
|
1.8
|
21.5
|
0.6
|
|
HH
|
A:TYR23
|
2.3
|
14.8
|
1.0
|
|
OH
|
A:TYR23
|
2.9
|
12.4
|
1.0
|
|
O
|
A:HOH1248
|
3.0
|
38.1
|
0.8
|
|
HE2
|
A:TYR23
|
3.2
|
13.8
|
1.0
|
|
O
|
A:HOH1155
|
3.4
|
21.0
|
1.0
|
|
CZ
|
A:TYR23
|
3.6
|
11.1
|
1.0
|
|
HA3
|
A:GLY104
|
3.6
|
15.1
|
1.0
|
|
CE2
|
A:TYR23
|
3.7
|
11.5
|
1.0
|
|
O
|
A:HOH1159
|
3.7
|
21.0
|
1.0
|
|
CA
|
A:GLY104
|
4.4
|
12.6
|
1.0
|
|
HA2
|
A:GLY104
|
4.5
|
15.1
|
1.0
|
|
O
|
A:HOH1315
|
4.6
|
36.5
|
1.0
|
|
O
|
A:ARG21
|
4.6
|
15.6
|
1.0
|
|
CE1
|
A:TYR23
|
4.7
|
11.8
|
1.0
|
|
H
|
A:MET105
|
4.7
|
13.2
|
1.0
|
|
O
|
A:HOH1332
|
4.8
|
19.4
|
0.3
|
|
HB3
|
A:ARG21
|
4.9
|
20.7
|
0.5
|
|
CD2
|
A:TYR23
|
4.9
|
11.5
|
1.0
|
|
HB3
|
A:ARG21
|
4.9
|
20.0
|
0.5
|
|
HH21
|
A:ARG21
|
5.0
|
30.6
|
0.5
|
|
HE1
|
A:TYR23
|
5.0
|
14.2
|
1.0
|
|
Chlorine binding site 7 out
of 7 in 8zsu
Go back to
Chlorine Binding Sites List in 8zsu
Chlorine binding site 7 out
of 7 in the Lysozyme Crystallized with Bioassembler in Space Microgravity
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Lysozyme Crystallized with Bioassembler in Space Microgravity within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1012
b:19.2
occ:0.45
|
CL
|
A:CL1012
|
0.0
|
19.2
|
0.5
|
|
CL
|
A:CL1012
|
1.1
|
15.0
|
0.6
|
|
HH
|
A:TYR23
|
2.1
|
14.8
|
1.0
|
|
O
|
A:HOH1300
|
2.6
|
21.5
|
0.6
|
|
HA3
|
A:GLY104
|
2.7
|
15.1
|
1.0
|
|
O
|
A:HOH1159
|
2.8
|
21.0
|
1.0
|
|
O
|
A:HOH1248
|
2.9
|
38.1
|
0.8
|
|
OH
|
A:TYR23
|
2.9
|
12.4
|
1.0
|
|
HE2
|
A:TYR23
|
3.0
|
13.8
|
1.0
|
|
HA2
|
A:GLY104
|
3.5
|
15.1
|
1.0
|
|
CA
|
A:GLY104
|
3.5
|
12.6
|
1.0
|
|
CE2
|
A:TYR23
|
3.6
|
11.5
|
1.0
|
|
CZ
|
A:TYR23
|
3.7
|
11.1
|
1.0
|
|
O
|
A:HOH1113
|
4.0
|
23.6
|
0.5
|
|
N
|
A:GLY104
|
4.1
|
13.0
|
1.0
|
|
O
|
A:HOH1155
|
4.2
|
21.0
|
1.0
|
|
H
|
A:MET105
|
4.3
|
13.2
|
1.0
|
|
H
|
A:GLY104
|
4.4
|
15.6
|
0.4
|
|
H
|
A:GLY104
|
4.4
|
15.6
|
0.6
|
|
O
|
A:HOH1332
|
4.4
|
19.4
|
0.3
|
|
HH21
|
A:ARG21
|
4.4
|
30.6
|
0.5
|
|
HB3
|
A:ARG21
|
4.6
|
20.7
|
0.5
|
|
HE
|
A:ARG21
|
4.6
|
28.3
|
0.5
|
|
HB3
|
A:ARG21
|
4.6
|
20.0
|
0.5
|
|
O
|
A:HOH1107
|
4.7
|
24.7
|
0.8
|
|
C
|
A:ASN103
|
4.7
|
12.5
|
0.6
|
|
C
|
A:GLY104
|
4.7
|
11.3
|
1.0
|
|
HG22
|
A:VAL99
|
4.7
|
16.4
|
1.0
|
|
C
|
A:ASN103
|
4.7
|
15.4
|
0.4
|
|
O
|
A:VAL99
|
4.8
|
14.8
|
1.0
|
|
O
|
A:ASN103
|
4.8
|
11.8
|
0.6
|
|
N
|
A:MET105
|
4.8
|
11.0
|
1.0
|
|
O
|
A:ARG21
|
4.9
|
15.6
|
1.0
|
|
CD2
|
A:TYR23
|
4.9
|
11.5
|
1.0
|
|
CE1
|
A:TYR23
|
4.9
|
11.8
|
1.0
|
|
O
|
A:ASN103
|
5.0
|
15.3
|
0.4
|
|
Reference:
C.Maccarthy,
E.Koudan,
M.Shevtsov,
V.Parfenov,
S.Petrov,
A.Levin,
F.Senatov,
N.Sykilinda,
S.Ostrovskiy,
S.Pekov,
I.Gushchin,
I.Popov,
E.Zinovev,
A.Bogorodskiy,
A.Mishin,
V.Ivanovich,
A.Rogachev,
Y.Khesuani,
V.Borshchevskiy.
Exploring the Potential of A Bioassembler For Protein Crystallization in Space. Npj Microgravity 2025.
DOI: 10.1038/S41526-025-00477-W
Page generated: Sun Jul 13 15:55:37 2025
|
