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Chlorine in PDB 8ztb: Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.

Enzymatic activity of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.

All present enzymatic activity of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.:
3.5.2.6;

Protein crystallography data

The structure of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase., PDB code: 8ztb was solved by S.Baidya, K.Dhankhar, S.Hazra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.68 / 2.90
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.418, 49.301, 110.696, 90, 92.35, 90
R / Rfree (%) 21 / 27.2

Other elements in 8ztb:

The structure of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. also contains other interesting chemical elements:

Zinc (Zn) 4 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. (pdb code 8ztb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase., PDB code: 8ztb:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 8ztb

Go back to Chlorine Binding Sites List in 8ztb
Chlorine binding site 1 out of 4 in the Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl306

b:56.6
occ:1.00
 OG B:SER98 2.9 15.2 1.0
O B:ASP141 3.1 21.5 1.0
CD1 B:TYR133 3.4 18.0 1.0
CB B:SER98 3.4 17.8 1.0
CE1 B:TYR133 3.4 17.2 1.0
CD1 B:LEU100 3.5 20.7 1.0
CB B:LEU100 3.7 20.6 1.0
CG B:LEU100 3.7 20.3 1.0
CG1 B:VAL143 3.8 19.2 1.0
C B:ASP141 3.8 21.2 1.0
CA B:ASP141 3.9 21.9 1.0
CG B:TYR133 4.0 18.2 1.0
CZ B:TYR133 4.1 16.1 1.0
CB B:ASP141 4.2 22.6 1.0
CD2 B:TYR133 4.6 16.2 1.0
CE2 B:TYR133 4.6 16.1 1.0
N B:LEU100 4.6 21.8 1.0
CA B:LEU100 4.7 21.5 1.0
CB B:TYR133 4.7 21.2 1.0
OH B:TYR133 4.7 14.7 1.0
OG1 B:THR101 4.8 24.1 1.0
CA B:SER98 4.9 20.0 1.0
O B:PRO140 4.9 18.7 1.0

Chlorine binding site 2 out of 4 in 8ztb

Go back to Chlorine Binding Sites List in 8ztb
Chlorine binding site 2 out of 4 in the Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl307

b:58.8
occ:1.00
 O B:GLU86 3.1 23.8 1.0
CB B:ASN89 3.3 21.6 1.0
N B:SER90 3.6 24.7 1.0
C B:GLU86 3.9 22.9 1.0
C B:ASN89 4.0 25.3 1.0
CA B:GLU86 4.0 22.5 1.0
CB B:SER90 4.1 23.5 1.0
CA B:SER90 4.2 25.9 1.0
CA B:ASN89 4.2 22.9 1.0
CG B:GLU86 4.2 21.6 1.0
CG1 B:VAL111 4.2 20.8 1.0
CG B:ASN89 4.4 22.9 1.0
CB B:GLU86 4.4 22.5 1.0
OD1 B:ASN89 4.5 24.6 1.0
O B:ASN89 4.6 26.8 1.0
N B:ASN89 4.8 22.8 1.0
O B:ILE85 4.9 24.8 1.0

Chlorine binding site 3 out of 4 in 8ztb

Go back to Chlorine Binding Sites List in 8ztb
Chlorine binding site 3 out of 4 in the Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl308

b:51.0
occ:1.00
 O B:SER74 2.6 26.3 1.0
OG1 B:THR101 2.9 24.1 1.0
N B:SER98 3.3 20.1 1.0
CB B:THR101 3.4 23.1 1.0
CG2 B:VAL143 3.5 20.1 1.0
C B:SER74 3.8 25.3 1.0
CG2 B:THR101 3.8 22.9 1.0
CA B:ALA97 3.8 19.7 1.0
OG B:SER98 3.8 15.2 1.0
C B:SER75 3.9 21.9 1.0
CB B:SER98 4.0 17.8 1.0
CZ B:PHE117 4.0 24.5 1.0
O B:SER75 4.0 18.9 1.0
C B:ALA97 4.1 20.3 1.0
CB B:ALA97 4.1 17.8 1.0
N B:HIS76 4.2 21.1 1.0
CA B:SER75 4.2 23.9 1.0
CA B:SER98 4.2 20.0 1.0
N B:SER75 4.4 25.2 1.0
CA B:HIS76 4.5 23.1 1.0
OD2 B:ASP141 4.5 23.3 1.0
CE2 B:PHE117 4.6 23.9 1.0
CG1 B:VAL143 4.6 19.2 1.0
CB B:VAL143 4.7 20.5 1.0
O B:ASP141 4.7 21.5 1.0
CA B:THR101 4.8 21.4 1.0
CA B:SER74 4.9 25.1 1.0
CE1 B:PHE117 4.9 24.3 1.0

Chlorine binding site 4 out of 4 in 8ztb

Go back to Chlorine Binding Sites List in 8ztb
Chlorine binding site 4 out of 4 in the Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl309

b:71.5
occ:1.00
 OE2 B:GLU198 3.2 31.3 1.0
CG B:GLU198 3.3 30.4 1.0
CD B:GLU198 3.4 31.9 1.0
NE2 A:HIS33 3.7 31.8 1.0
CB B:GLU198 3.8 27.8 1.0
OE1 B:GLU198 4.2 30.4 1.0
CE1 A:HIS33 4.5 31.6 1.0
CD2 A:HIS33 4.6 32.7 1.0
OG1 A:THR19 4.7 22.7 1.0
CG2 A:THR19 4.7 20.9 1.0

Reference:

S.Baidya, K.Dhankhar, S.Hazra. Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase. To Be Published.
Page generated: Sun Jul 13 15:56:26 2025

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