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Chlorine in PDB 8zva: Structure of Shosa From E.Coli Apec O1

Protein crystallography data

The structure of Structure of Shosa From E.Coli Apec O1, PDB code: 8zva was solved by Y.Yu, Q.Chen, H.Pu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.52 / 1.90
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 70.029, 70.029, 120.323, 90, 90, 90
R / Rfree (%) 24.7 / 27.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Shosa From E.Coli Apec O1 (pdb code 8zva). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Shosa From E.Coli Apec O1, PDB code: 8zva:

Chlorine binding site 1 out of 1 in 8zva

Go back to Chlorine Binding Sites List in 8zva
Chlorine binding site 1 out of 1 in the Structure of Shosa From E.Coli Apec O1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Shosa From E.Coli Apec O1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:82.5
occ:1.00
HH11 A:ARG39 2.3 77.2 1.0
NH1 A:ARG39 2.9 64.2 1.0
O A:HOH502 2.9 43.7 1.0
HD3 A:ARG39 2.9 78.3 1.0
HH12 A:ARG39 3.1 77.2 1.0
OE2 A:GLU12 3.2 52.5 1.0
HE2 A:PHE40 3.3 49.4 1.0
CE2 A:PHE40 3.6 41.1 1.0
HB1 A:ALA34 3.7 58.3 1.0
HB2 A:ALA34 3.7 58.3 1.0
HA A:ARG39 3.7 60.4 1.0
CD A:ARG39 3.7 65.2 1.0
HD2 A:PHE40 3.8 52.9 1.0
CZ A:ARG39 3.8 75.4 1.0
HG2 A:GLU12 3.8 61.5 1.0
CD2 A:PHE40 3.9 44.0 1.0
HD2 A:ARG39 3.9 78.3 1.0
H A:PHE40 4.0 52.7 1.0
CD A:GLU12 4.1 55.2 1.0
CB A:ALA34 4.1 48.5 1.0
NE A:ARG39 4.1 64.7 1.0
HB3 A:PHE117 4.2 49.8 1.0
HG3 A:GLU12 4.3 61.5 1.0
CG A:GLU12 4.3 51.2 1.0
HA A:ALA34 4.3 55.0 1.0
CZ A:PHE40 4.4 42.5 1.0
O A:ILE38 4.4 54.9 1.0
O A:PHE117 4.6 34.4 1.0
HB3 A:HIS99 4.6 50.6 1.0
HZ A:PHE40 4.7 51.1 1.0
CA A:ARG39 4.7 50.2 1.0
ND1 A:HIS99 4.8 41.0 1.0
N A:PHE40 4.8 43.8 1.0
CG A:PHE40 4.8 40.7 1.0
CA A:ALA34 4.8 45.8 1.0
NH2 A:ARG39 4.8 74.6 1.0
HE A:ARG39 4.9 77.8 1.0
HB3 A:ALA34 4.9 58.3 1.0
HE3 A:TRP118 5.0 51.8 1.0
HH22 A:ARG39 5.0 89.6 1.0
CG A:ARG39 5.0 58.5 1.0

Reference:

Y.Yu, Q.Chen. A Toxin-Antitoxin System Provides Phage Defense Via Dna Damage and Repair Nat Commun 2025.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-025-58540-9
Page generated: Sun Jul 13 15:57:21 2025

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