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Chlorine in PDB 9dcg: Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae

Protein crystallography data

The structure of Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae, PDB code: 9dcg was solved by Y.Kim, N.Maltseva, S.Shatsman, A.Joachimiak, Center For Structuralbiology Of Infectious Diseases (Csbid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.87 / 2.09
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 37.499, 43.744, 47.851, 64.07, 80.79, 79.86
R / Rfree (%) 21.5 / 25.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae (pdb code 9dcg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae, PDB code: 9dcg:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 9dcg

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Chlorine binding site 1 out of 4 in the Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:66.2
occ:1.00
N A:GLU115 3.8 26.3 1.0
CE A:LYS181 4.1 37.4 1.0
O A:GLU115 4.1 24.1 1.0
CA A:ILE114 4.3 28.0 1.0
O A:MSE113 4.4 39.4 1.0
NZ A:LYS181 4.5 36.6 1.0
C A:ILE114 4.5 26.7 1.0
CG2 A:ILE114 4.6 26.5 1.0
CA A:GLU115 4.7 25.4 1.0
CB A:GLU115 4.8 29.4 1.0
C A:GLU115 4.8 25.4 1.0

Chlorine binding site 2 out of 4 in 9dcg

Go back to Chlorine Binding Sites List in 9dcg
Chlorine binding site 2 out of 4 in the Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:75.6
occ:1.00
NZ A:LYS205 3.4 36.8 1.0
NE2 A:GLN209 3.6 36.5 1.0
CE A:LYS205 3.8 30.8 1.0
CD A:GLN209 4.8 42.4 1.0

Chlorine binding site 3 out of 4 in 9dcg

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Chlorine binding site 3 out of 4 in the Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:45.9
occ:1.00
CG A:GLN164 3.4 61.1 1.0
CA A:GLY162 3.4 40.5 1.0
O A:GLN161 3.4 54.4 1.0
N A:GLY165 3.6 43.8 1.0
C A:GLY162 3.7 40.8 1.0
N A:GLN164 3.8 36.9 1.0
C A:GLN161 4.0 38.0 1.0
N A:GLY162 4.0 46.2 1.0
N A:PRO163 4.1 36.5 1.0
C A:GLN164 4.1 37.4 1.0
O A:GLY162 4.2 36.2 1.0
CA A:GLY165 4.2 44.6 1.0
CA A:GLN164 4.3 43.5 1.0
CD A:PRO163 4.3 36.9 1.0
CB A:GLN164 4.3 37.9 1.0
CD A:GLN164 4.4 70.1 1.0
NE2 A:GLN164 4.8 52.4 1.0
C A:PRO163 4.8 36.3 1.0
O A:HOH407 5.0 28.8 1.0

Chlorine binding site 4 out of 4 in 9dcg

Go back to Chlorine Binding Sites List in 9dcg
Chlorine binding site 4 out of 4 in the Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:52.1
occ:1.00
NZ B:LYS205 3.4 30.6 1.0
OE1 B:GLN209 3.7 54.3 1.0
CE B:LYS205 3.7 34.5 1.0
CD B:GLN209 4.5 45.6 1.0
NE2 B:GLN209 4.8 58.8 1.0

Reference:

Y.Kim, N.Maltseva, S.Shatsman, A.Joachimiak, Center For Structural Biology Of Infectious Diseases (Csbid). Crystal Structure of the Thiol:Disulfide Interchange Protein Dsbc From Vibrio Cholerae To Be Published.
Page generated: Sun Jul 13 16:16:36 2025

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