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Chlorine in PDB 9eqc: Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes

Enzymatic activity of Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes

All present enzymatic activity of Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes:
1.16.3.1;

Protein crystallography data

The structure of Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes, PDB code: 9eqc was solved by Z.Bugg, J.M.Bradley, N.E.Le Brun, A.M.Hemmings, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.75 / 1.60
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 182.74, 182.74, 182.74, 90, 90, 90
R / Rfree (%) 18.9 / 23.7

Other elements in 9eqc:

The structure of Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes also contains other interesting chemical elements:

Iron (Fe) 6 atoms
Magnesium (Mg) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes (pdb code 9eqc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes, PDB code: 9eqc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 9eqc

Go back to Chlorine Binding Sites List in 9eqc
Chlorine binding site 1 out of 2 in the Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl213

b:75.3
occ:0.25
FE A:FE204 2.2 87.0 0.9
HE1 A:HIS173 2.3 60.4 1.0
CE1 A:HIS173 3.1 50.3 1.0
HD22 A:LEU169 3.4 28.8 1.0
NE2 A:HIS173 3.7 53.0 1.0
HD21 A:LEU169 4.0 28.8 1.0
CD2 A:LEU169 4.1 24.0 1.0
ND1 A:HIS173 4.3 47.0 1.0
O A:HOH415 4.5 34.2 0.2
HD13 A:LEU169 4.5 28.4 1.0
HD1 A:HIS173 4.5 56.4 1.0
HD23 A:LEU169 4.7 28.8 1.0
HB3 A:LEU169 5.0 28.0 1.0

Chlorine binding site 2 out of 2 in 9eqc

Go back to Chlorine Binding Sites List in 9eqc
Chlorine binding site 2 out of 2 in the Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Iron Loaded Human H-Chain Ferritin Exposed to Oxygen For 20 Minutes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl214

b:88.7
occ:1.00
OE2 A:GLU64 2.7 46.3 1.0
CD A:GLU64 3.4 43.2 1.0
OE1 A:GLU64 3.6 45.9 1.0
O A:HOH412 4.2 64.0 1.0
CG A:GLU64 4.7 36.5 1.0
HG2 A:GLU64 4.8 43.8 1.0
HG3 A:GLU64 4.8 43.8 1.0

Reference:

J.M.Bradley, Z.Bugg, G.R.Moore, A.M.Hemmings, N.Le-Brun. The Core Nucleation Site of Human Mitochondrial Ferritin: Observation of the Nascent Mineral To Be Published.
Page generated: Sun Jul 13 16:33:46 2025

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