Chlorine in PDB 9j00: Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
Protein crystallography data
The structure of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu, PDB code: 9j00
was solved by
R.Goswami,
S.Biswas,
S.Chakraborti,
Y.Manickam,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
78.97 /
1.83
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
58.504,
37.345,
79.437,
90,
96.23,
90
|
R / Rfree (%)
|
19 /
23.6
|
Other elements in 9j00:
The structure of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
(pdb code 9j00). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the
Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu, PDB code: 9j00:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
Chlorine binding site 1 out
of 7 in 9j00
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Chlorine Binding Sites List in 9j00
Chlorine binding site 1 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl206
b:20.3
occ:0.84
|
CD
|
A:CD201
|
2.5
|
22.0
|
1.0
|
O
|
A:HOH323
|
2.9
|
26.4
|
1.0
|
OD2
|
A:ASP40
|
3.5
|
21.4
|
1.0
|
OD1
|
A:ASP40
|
3.7
|
18.5
|
1.0
|
CG
|
A:ASP40
|
3.9
|
19.8
|
1.0
|
CL
|
A:CL207
|
3.9
|
20.1
|
1.0
|
O
|
A:HOH309
|
4.2
|
41.6
|
1.0
|
CA
|
A:ASP10
|
4.2
|
17.5
|
1.0
|
N
|
A:ASP10
|
4.4
|
16.4
|
1.0
|
OD1
|
A:ASP10
|
4.5
|
19.6
|
1.0
|
CB
|
A:PRO39
|
4.9
|
21.4
|
1.0
|
|
Chlorine binding site 2 out
of 7 in 9j00
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Chlorine Binding Sites List in 9j00
Chlorine binding site 2 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl207
b:20.1
occ:1.00
|
CD
|
A:CD201
|
2.5
|
22.0
|
1.0
|
N
|
A:GLY11
|
3.2
|
19.5
|
1.0
|
O
|
A:HOH317
|
3.3
|
19.9
|
1.0
|
N
|
A:ASP10
|
3.6
|
16.4
|
1.0
|
OD2
|
A:ASP40
|
3.6
|
21.4
|
1.0
|
O
|
A:LYS8
|
3.7
|
21.2
|
1.0
|
CB
|
A:LYS8
|
3.9
|
27.6
|
1.0
|
C
|
A:LYS8
|
3.9
|
20.1
|
1.0
|
CA
|
A:GLY11
|
3.9
|
18.6
|
1.0
|
CL
|
A:CL206
|
3.9
|
20.3
|
0.8
|
C
|
A:TYR9
|
4.1
|
16.6
|
1.0
|
CA
|
A:ASP10
|
4.1
|
17.5
|
1.0
|
C
|
A:ASP10
|
4.2
|
18.7
|
1.0
|
CE
|
A:LYS8
|
4.2
|
53.8
|
1.0
|
N
|
A:TYR9
|
4.3
|
20.7
|
1.0
|
CA
|
A:TYR9
|
4.3
|
21.2
|
1.0
|
CA
|
A:LYS8
|
4.5
|
26.6
|
1.0
|
CG
|
A:ASP40
|
4.8
|
19.8
|
1.0
|
O
|
A:TYR9
|
4.8
|
20.5
|
1.0
|
C
|
A:GLY11
|
4.9
|
21.7
|
1.0
|
CD
|
A:LYS8
|
4.9
|
46.2
|
1.0
|
CG
|
A:LYS8
|
4.9
|
38.6
|
1.0
|
|
Chlorine binding site 3 out
of 7 in 9j00
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Chlorine Binding Sites List in 9j00
Chlorine binding site 3 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl208
b:40.6
occ:0.91
|
CD
|
A:CD202
|
2.5
|
27.5
|
1.0
|
OD1
|
A:ASP21
|
3.3
|
24.5
|
1.0
|
OD2
|
A:ASP21
|
3.8
|
25.2
|
1.0
|
CG
|
A:ASP21
|
3.9
|
24.4
|
1.0
|
NH1
|
A:ARG78
|
4.6
|
35.4
|
1.0
|
O
|
A:HOH330
|
4.6
|
39.9
|
1.0
|
NH2
|
A:ARG78
|
5.0
|
28.3
|
1.0
|
|
Chlorine binding site 4 out
of 7 in 9j00
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Chlorine Binding Sites List in 9j00
Chlorine binding site 4 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl207
b:18.3
occ:1.00
|
CD
|
A:CD210
|
2.6
|
19.1
|
1.0
|
N
|
B:GLY11
|
3.2
|
13.7
|
1.0
|
N
|
B:ASP10
|
3.4
|
18.1
|
1.0
|
O
|
B:HOH326
|
3.4
|
21.0
|
1.0
|
NZ
|
A:LYS45
|
3.5
|
17.6
|
1.0
|
OD1
|
A:ASP33
|
3.6
|
17.1
|
1.0
|
CD
|
A:LYS45
|
3.6
|
19.9
|
1.0
|
O
|
B:LYS8
|
3.7
|
17.9
|
1.0
|
OD2
|
B:ASP40
|
3.7
|
19.8
|
1.0
|
CB
|
B:LYS8
|
3.8
|
20.9
|
1.0
|
C
|
B:LYS8
|
3.8
|
17.9
|
1.0
|
C
|
B:TYR9
|
3.9
|
14.4
|
1.0
|
O
|
A:HOH344
|
3.9
|
18.1
|
1.0
|
O
|
A:HOH310
|
4.0
|
22.8
|
1.0
|
CA
|
B:GLY11
|
4.0
|
13.7
|
1.0
|
CE
|
A:LYS45
|
4.0
|
19.2
|
1.0
|
CA
|
B:ASP10
|
4.1
|
17.0
|
1.0
|
CA
|
B:TYR9
|
4.1
|
14.9
|
1.0
|
N
|
B:TYR9
|
4.1
|
15.4
|
1.0
|
C
|
B:ASP10
|
4.2
|
15.2
|
1.0
|
CG
|
A:ASP33
|
4.4
|
17.4
|
1.0
|
CA
|
B:LYS8
|
4.4
|
19.5
|
1.0
|
OD2
|
A:ASP33
|
4.5
|
18.8
|
1.0
|
O
|
B:TYR9
|
4.6
|
14.8
|
1.0
|
CG
|
B:ASP40
|
4.8
|
16.2
|
1.0
|
CG
|
A:LYS45
|
4.8
|
16.7
|
1.0
|
O
|
B:HOH361
|
4.9
|
40.7
|
1.0
|
CE
|
B:LYS8
|
4.9
|
40.7
|
1.0
|
CD
|
B:LYS8
|
4.9
|
34.2
|
1.0
|
C
|
B:GLY11
|
4.9
|
17.6
|
1.0
|
CG
|
B:LYS8
|
5.0
|
28.7
|
1.0
|
|
Chlorine binding site 5 out
of 7 in 9j00
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Chlorine Binding Sites List in 9j00
Chlorine binding site 5 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl208
b:22.6
occ:0.99
|
CD
|
B:CD204
|
2.6
|
26.8
|
1.0
|
NZ
|
B:LYS109
|
3.3
|
18.8
|
1.0
|
NH1
|
B:ARG100
|
3.5
|
21.5
|
1.0
|
OE2
|
B:GLU76
|
3.6
|
26.2
|
1.0
|
CE
|
B:LYS109
|
3.8
|
17.9
|
1.0
|
O
|
B:ALA103
|
3.8
|
23.1
|
1.0
|
CB
|
B:ASN72
|
3.9
|
15.6
|
1.0
|
O
|
B:HOH394
|
3.9
|
50.3
|
1.0
|
CA
|
B:GLN104
|
4.1
|
22.3
|
1.0
|
CD
|
B:GLU76
|
4.1
|
23.7
|
1.0
|
CD
|
B:LYS109
|
4.2
|
21.4
|
1.0
|
CG
|
B:ASN72
|
4.2
|
16.9
|
1.0
|
OE1
|
B:GLU76
|
4.3
|
25.8
|
1.0
|
C
|
B:ALA103
|
4.3
|
21.0
|
1.0
|
OD1
|
B:ASN72
|
4.3
|
17.5
|
1.0
|
N
|
B:GLN104
|
4.4
|
19.3
|
1.0
|
O
|
B:HOH393
|
4.4
|
54.6
|
1.0
|
CZ
|
B:ARG100
|
4.6
|
22.8
|
1.0
|
O
|
B:GLN104
|
4.8
|
23.9
|
1.0
|
NH2
|
B:ARG100
|
4.9
|
21.0
|
1.0
|
C
|
B:GLN104
|
4.9
|
21.4
|
1.0
|
CB
|
B:GLN104
|
5.0
|
24.6
|
1.0
|
O
|
B:HOH318
|
5.0
|
25.4
|
1.0
|
|
Chlorine binding site 6 out
of 7 in 9j00
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Chlorine Binding Sites List in 9j00
Chlorine binding site 6 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl205
b:33.9
occ:1.00
|
CD
|
C:CD202
|
2.3
|
26.1
|
1.0
|
O
|
C:HOH330
|
2.9
|
23.1
|
1.0
|
OD2
|
C:ASP40
|
3.3
|
23.6
|
1.0
|
OD1
|
C:ASP40
|
3.5
|
22.4
|
1.0
|
CG
|
C:ASP40
|
3.6
|
22.8
|
1.0
|
CL
|
C:CL206
|
3.7
|
23.3
|
1.0
|
CA
|
C:ASP10
|
4.1
|
13.7
|
1.0
|
N
|
C:ASP10
|
4.1
|
16.4
|
1.0
|
OD1
|
C:ASP10
|
4.4
|
18.6
|
1.0
|
O
|
C:HOH335
|
4.7
|
34.0
|
1.0
|
N
|
C:GLY11
|
4.9
|
18.8
|
1.0
|
C
|
C:ASP10
|
4.9
|
16.3
|
1.0
|
CB
|
C:ASP40
|
5.0
|
18.5
|
1.0
|
|
Chlorine binding site 7 out
of 7 in 9j00
Go back to
Chlorine Binding Sites List in 9j00
Chlorine binding site 7 out
of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl206
b:23.3
occ:1.00
|
CD
|
C:CD202
|
2.6
|
26.1
|
1.0
|
N
|
C:GLY11
|
3.2
|
18.8
|
1.0
|
O
|
C:HOH366
|
3.4
|
55.8
|
1.0
|
N
|
C:ASP10
|
3.5
|
16.4
|
1.0
|
O
|
C:HOH335
|
3.5
|
34.0
|
1.0
|
OD2
|
C:ASP40
|
3.7
|
23.6
|
1.0
|
CL
|
C:CL205
|
3.7
|
33.9
|
1.0
|
O
|
C:LYS8
|
3.8
|
27.8
|
1.0
|
CB
|
C:LYS8
|
3.8
|
26.1
|
1.0
|
CA
|
C:GLY11
|
3.9
|
19.5
|
1.0
|
C
|
C:LYS8
|
3.9
|
24.6
|
1.0
|
C
|
C:TYR9
|
3.9
|
21.2
|
1.0
|
CA
|
C:ASP10
|
4.1
|
13.7
|
1.0
|
C
|
C:ASP10
|
4.1
|
16.3
|
1.0
|
N
|
C:TYR9
|
4.2
|
21.3
|
1.0
|
CA
|
C:TYR9
|
4.2
|
22.1
|
1.0
|
CA
|
C:LYS8
|
4.5
|
25.8
|
1.0
|
O
|
C:TYR9
|
4.7
|
21.1
|
1.0
|
CG
|
C:ASP40
|
4.8
|
22.8
|
1.0
|
C
|
C:GLY11
|
4.8
|
22.2
|
1.0
|
CD
|
C:LYS8
|
4.9
|
34.7
|
1.0
|
CG
|
C:LYS8
|
5.0
|
30.7
|
1.0
|
N
|
C:ILE12
|
5.0
|
21.6
|
1.0
|
|
Reference:
S.Biswas,
R.Goswami,
R.L.Barbosa,
S.Sung,
J.A.Marquez,
S.Chakraborti,
Y.Manickam.
Crystal Structure and Ligand Binding Studies of Chemosensory and Sensory Appendage Proteins To Be Published.
Page generated: Sat Aug 23 00:43:04 2025
|