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Chlorine in PDB 9j00: Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu

Protein crystallography data

The structure of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu, PDB code: 9j00 was solved by R.Goswami, S.Biswas, S.Chakraborti, Y.Manickam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 78.97 / 1.83
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.504, 37.345, 79.437, 90, 96.23, 90
R / Rfree (%) 19 / 23.6

Other elements in 9j00:

The structure of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu also contains other interesting chemical elements:

Cadmium (Cd) 16 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu (pdb code 9j00). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu, PDB code: 9j00:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 9j00

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Chlorine binding site 1 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl206

b:20.3
occ:0.84
CD A:CD201 2.5 22.0 1.0
O A:HOH323 2.9 26.4 1.0
OD2 A:ASP40 3.5 21.4 1.0
OD1 A:ASP40 3.7 18.5 1.0
CG A:ASP40 3.9 19.8 1.0
CL A:CL207 3.9 20.1 1.0
O A:HOH309 4.2 41.6 1.0
CA A:ASP10 4.2 17.5 1.0
N A:ASP10 4.4 16.4 1.0
OD1 A:ASP10 4.5 19.6 1.0
CB A:PRO39 4.9 21.4 1.0

Chlorine binding site 2 out of 7 in 9j00

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Chlorine binding site 2 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl207

b:20.1
occ:1.00
CD A:CD201 2.5 22.0 1.0
N A:GLY11 3.2 19.5 1.0
O A:HOH317 3.3 19.9 1.0
N A:ASP10 3.6 16.4 1.0
OD2 A:ASP40 3.6 21.4 1.0
O A:LYS8 3.7 21.2 1.0
CB A:LYS8 3.9 27.6 1.0
C A:LYS8 3.9 20.1 1.0
CA A:GLY11 3.9 18.6 1.0
CL A:CL206 3.9 20.3 0.8
C A:TYR9 4.1 16.6 1.0
CA A:ASP10 4.1 17.5 1.0
C A:ASP10 4.2 18.7 1.0
CE A:LYS8 4.2 53.8 1.0
N A:TYR9 4.3 20.7 1.0
CA A:TYR9 4.3 21.2 1.0
CA A:LYS8 4.5 26.6 1.0
CG A:ASP40 4.8 19.8 1.0
O A:TYR9 4.8 20.5 1.0
C A:GLY11 4.9 21.7 1.0
CD A:LYS8 4.9 46.2 1.0
CG A:LYS8 4.9 38.6 1.0

Chlorine binding site 3 out of 7 in 9j00

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Chlorine binding site 3 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl208

b:40.6
occ:0.91
CD A:CD202 2.5 27.5 1.0
OD1 A:ASP21 3.3 24.5 1.0
OD2 A:ASP21 3.8 25.2 1.0
CG A:ASP21 3.9 24.4 1.0
NH1 A:ARG78 4.6 35.4 1.0
O A:HOH330 4.6 39.9 1.0
NH2 A:ARG78 5.0 28.3 1.0

Chlorine binding site 4 out of 7 in 9j00

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Chlorine binding site 4 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl207

b:18.3
occ:1.00
CD A:CD210 2.6 19.1 1.0
N B:GLY11 3.2 13.7 1.0
N B:ASP10 3.4 18.1 1.0
O B:HOH326 3.4 21.0 1.0
NZ A:LYS45 3.5 17.6 1.0
OD1 A:ASP33 3.6 17.1 1.0
CD A:LYS45 3.6 19.9 1.0
O B:LYS8 3.7 17.9 1.0
OD2 B:ASP40 3.7 19.8 1.0
CB B:LYS8 3.8 20.9 1.0
C B:LYS8 3.8 17.9 1.0
C B:TYR9 3.9 14.4 1.0
O A:HOH344 3.9 18.1 1.0
O A:HOH310 4.0 22.8 1.0
CA B:GLY11 4.0 13.7 1.0
CE A:LYS45 4.0 19.2 1.0
CA B:ASP10 4.1 17.0 1.0
CA B:TYR9 4.1 14.9 1.0
N B:TYR9 4.1 15.4 1.0
C B:ASP10 4.2 15.2 1.0
CG A:ASP33 4.4 17.4 1.0
CA B:LYS8 4.4 19.5 1.0
OD2 A:ASP33 4.5 18.8 1.0
O B:TYR9 4.6 14.8 1.0
CG B:ASP40 4.8 16.2 1.0
CG A:LYS45 4.8 16.7 1.0
O B:HOH361 4.9 40.7 1.0
CE B:LYS8 4.9 40.7 1.0
CD B:LYS8 4.9 34.2 1.0
C B:GLY11 4.9 17.6 1.0
CG B:LYS8 5.0 28.7 1.0

Chlorine binding site 5 out of 7 in 9j00

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Chlorine binding site 5 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl208

b:22.6
occ:0.99
CD B:CD204 2.6 26.8 1.0
NZ B:LYS109 3.3 18.8 1.0
NH1 B:ARG100 3.5 21.5 1.0
OE2 B:GLU76 3.6 26.2 1.0
CE B:LYS109 3.8 17.9 1.0
O B:ALA103 3.8 23.1 1.0
CB B:ASN72 3.9 15.6 1.0
O B:HOH394 3.9 50.3 1.0
CA B:GLN104 4.1 22.3 1.0
CD B:GLU76 4.1 23.7 1.0
CD B:LYS109 4.2 21.4 1.0
CG B:ASN72 4.2 16.9 1.0
OE1 B:GLU76 4.3 25.8 1.0
C B:ALA103 4.3 21.0 1.0
OD1 B:ASN72 4.3 17.5 1.0
N B:GLN104 4.4 19.3 1.0
O B:HOH393 4.4 54.6 1.0
CZ B:ARG100 4.6 22.8 1.0
O B:GLN104 4.8 23.9 1.0
NH2 B:ARG100 4.9 21.0 1.0
C B:GLN104 4.9 21.4 1.0
CB B:GLN104 5.0 24.6 1.0
O B:HOH318 5.0 25.4 1.0

Chlorine binding site 6 out of 7 in 9j00

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Chlorine binding site 6 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl205

b:33.9
occ:1.00
CD C:CD202 2.3 26.1 1.0
O C:HOH330 2.9 23.1 1.0
OD2 C:ASP40 3.3 23.6 1.0
OD1 C:ASP40 3.5 22.4 1.0
CG C:ASP40 3.6 22.8 1.0
CL C:CL206 3.7 23.3 1.0
CA C:ASP10 4.1 13.7 1.0
N C:ASP10 4.1 16.4 1.0
OD1 C:ASP10 4.4 18.6 1.0
O C:HOH335 4.7 34.0 1.0
N C:GLY11 4.9 18.8 1.0
C C:ASP10 4.9 16.3 1.0
CB C:ASP40 5.0 18.5 1.0

Chlorine binding site 7 out of 7 in 9j00

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Chlorine binding site 7 out of 7 in the Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure Sensory Appendage Protein 2 From Anopheles Culicifacies in Space Group P21 with Three Molecules Per Asu within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl206

b:23.3
occ:1.00
CD C:CD202 2.6 26.1 1.0
N C:GLY11 3.2 18.8 1.0
O C:HOH366 3.4 55.8 1.0
N C:ASP10 3.5 16.4 1.0
O C:HOH335 3.5 34.0 1.0
OD2 C:ASP40 3.7 23.6 1.0
CL C:CL205 3.7 33.9 1.0
O C:LYS8 3.8 27.8 1.0
CB C:LYS8 3.8 26.1 1.0
CA C:GLY11 3.9 19.5 1.0
C C:LYS8 3.9 24.6 1.0
C C:TYR9 3.9 21.2 1.0
CA C:ASP10 4.1 13.7 1.0
C C:ASP10 4.1 16.3 1.0
N C:TYR9 4.2 21.3 1.0
CA C:TYR9 4.2 22.1 1.0
CA C:LYS8 4.5 25.8 1.0
O C:TYR9 4.7 21.1 1.0
CG C:ASP40 4.8 22.8 1.0
C C:GLY11 4.8 22.2 1.0
CD C:LYS8 4.9 34.7 1.0
CG C:LYS8 5.0 30.7 1.0
N C:ILE12 5.0 21.6 1.0

Reference:

S.Biswas, R.Goswami, R.L.Barbosa, S.Sung, J.A.Marquez, S.Chakraborti, Y.Manickam. Crystal Structure and Ligand Binding Studies of Chemosensory and Sensory Appendage Proteins To Be Published.
Page generated: Sat Aug 23 00:43:04 2025

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