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Chlorine in PDB 9p8z: Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis

Enzymatic activity of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis

All present enzymatic activity of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis:
3.5.4.16;

Protein crystallography data

The structure of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis, PDB code: 9p8z was solved by Seattle Structural Genomics Center For Infectious Disease, Seattlestructural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.76 / 2.74
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 87.547, 109.121, 122.548, 89.11, 88.12, 77.95
R / Rfree (%) 21 / 25.9

Other elements in 9p8z:

The structure of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis also contains other interesting chemical elements:

Zinc (Zn) 20 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis (pdb code 9p8z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis, PDB code: 9p8z:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 9p8z

Go back to Chlorine Binding Sites List in 9p8z
Chlorine binding site 1 out of 3 in the Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl502

b:70.4
occ:1.00
O F:ILE199 3.5 76.1 1.0
O F:LEU200 3.5 104.5 1.0
OE2 F:GLU83 3.8 60.9 1.0
OE1 F:GLU158 4.0 55.4 1.0
O F:ARG201 4.0 79.3 1.0
C F:LEU200 4.1 98.8 1.0
OE2 F:GLU158 4.3 68.9 1.0
CA F:LEU200 4.4 97.1 1.0
NE2 F:HIS102 4.5 47.7 1.0
CE1 F:HIS102 4.5 44.1 1.0
CD F:GLU158 4.6 61.5 1.0
C F:ARG201 4.6 82.9 1.0
NZ F:LYS82 4.6 70.4 1.0
C F:ILE199 4.7 80.6 1.0
CE F:LYS82 4.8 62.4 1.0

Chlorine binding site 2 out of 3 in 9p8z

Go back to Chlorine Binding Sites List in 9p8z
Chlorine binding site 2 out of 3 in the Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl502

b:68.0
occ:1.00
CG G:ARG38 3.0 70.8 1.0
CD G:ARG38 3.3 64.7 1.0
N G:GLY40 3.5 71.1 1.0
NH1 G:ARG38 3.5 66.4 1.0
N G:ASP39 3.7 77.2 1.0
CB G:ASP39 3.9 79.1 1.0
CA G:ASP39 4.1 74.6 1.0
C G:ASP39 4.2 72.2 1.0
NE G:ARG38 4.3 58.3 1.0
CA G:GLY40 4.3 65.5 1.0
NH2 J:ARG135 4.3 54.5 1.0
CZ G:ARG38 4.3 62.7 1.0
CB G:ARG38 4.5 71.8 1.0
C G:ARG38 4.7 77.1 1.0

Chlorine binding site 3 out of 3 in 9p8z

Go back to Chlorine Binding Sites List in 9p8z
Chlorine binding site 3 out of 3 in the Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Cl502

b:79.7
occ:1.00
OE2 J:GLU83 3.7 59.9 1.0
OE1 J:GLU158 3.7 48.4 1.0
O J:LEU200 3.8 85.5 1.0
O J:ILE199 4.1 63.1 1.0
OE2 J:GLU158 4.5 59.2 1.0
CD J:GLU158 4.5 48.1 1.0
NE2 J:HIS102 4.6 41.9 1.0
C J:LEU200 4.6 81.5 1.0
O J:ARG201 4.6 83.5 1.0
CE1 J:HIS102 4.7 45.6 1.0
CA J:LEU200 4.9 77.5 1.0
CA J:LYS202 5.0 94.2 1.0
CD J:GLU83 5.0 59.7 1.0
C J:ARG201 5.0 88.5 1.0

Reference:

S.Seibold, L.Liu, S.Lovell, K.P.Battaile. Crystal Structure of Gtp Cyclohydrolase 1 (Fole) From Mycobacterium Tuberculosis To Be Published.
Page generated: Mon Aug 4 21:13:45 2025

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