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Chlorine in PDB 9vwy: Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2

Enzymatic activity of Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2

All present enzymatic activity of Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2:
3.4.19.12;

Protein crystallography data

The structure of Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2, PDB code: 9vwy was solved by R.Arya, J.Ganesh, V.Prashar, M.Kumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.04 / 1.83
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 81.838, 81.838, 135.256, 90, 90, 120
R / Rfree (%) 17.3 / 19.5

Other elements in 9vwy:

The structure of Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2 also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2 (pdb code 9vwy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2, PDB code: 9vwy:

Chlorine binding site 1 out of 1 in 9vwy

Go back to Chlorine Binding Sites List in 9vwy
Chlorine binding site 1 out of 1 in the Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl409

b:22.9
occ:1.00
 O A:HOH806 3.0 36.4 1.0
O A:HOH628 3.1 23.6 1.0
O A:HOH602 3.1 26.9 1.0
N A:PHE127 3.2 16.8 1.0
CD2 A:PHE127 3.9 19.4 1.0
CA A:LYS126 3.9 23.6 1.0
CB A:PHE127 4.0 15.8 1.0
CA A:GLN133 4.0 17.6 1.0
CG A:GLN133 4.0 16.9 1.0
C A:LYS126 4.1 21.6 1.0
CA A:PHE127 4.1 18.8 1.0
CD2 A:TYR136 4.2 23.4 1.0
CB A:GLN133 4.3 18.8 1.0
O A:PHE127 4.3 19.0 1.0
CG A:PHE127 4.4 17.2 1.0
CB A:LYS126 4.5 28.1 1.0
O A:LEU125 4.6 23.9 1.0
C A:PHE127 4.7 20.9 1.0
O A:GLN133 4.7 19.3 1.0
N A:GLN133 4.8 16.0 1.0
O A:HOH789 4.9 40.8 1.0
O A:HOH786 4.9 29.9 1.0
O A:HOH803 4.9 44.2 1.0
C A:GLN133 4.9 18.7 1.0
CG A:LYS126 4.9 34.5 1.0
CE2 A:TYR136 4.9 25.8 1.0
CE2 A:PHE127 4.9 20.2 1.0
CB A:TYR136 4.9 18.9 1.0

Reference:

R.Arya, J.Ganesh, V.Prashar, M.Kumar. Crystal Structure of C270S Mutant of Papain-Like Protease (Plpro) From Sars-Cov-2 To Be Published.
Page generated: Sat Aug 23 00:47:34 2025

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