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Chlorine in PDB 1zei: Cross-Linked B28 Asp Insulin

Protein crystallography data

The structure of Cross-Linked B28 Asp Insulin, PDB code: 1zei was solved by J.L.Whittingham, E.J.Edwards, A.A.Antson, J.M.Clarkson, G.G.Dodson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.952, 64.772, 48.914, 90.00, 109.81, 90.00
R / Rfree (%) 17.6 / 23.2

Other elements in 1zei:

The structure of Cross-Linked B28 Asp Insulin also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cross-Linked B28 Asp Insulin (pdb code 1zei). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Cross-Linked B28 Asp Insulin, PDB code: 1zei:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1zei

Go back to Chlorine Binding Sites List in 1zei
Chlorine binding site 1 out of 2 in the Cross-Linked B28 Asp Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cross-Linked B28 Asp Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl55

b:15.9
occ:1.00
ZN B:ZN54 2.2 12.3 1.0
O F:HOH72 3.3 38.7 1.0
NE2 B:HIS10 3.4 12.0 1.0
NE2 F:HIS10 3.4 14.0 1.0
NE2 D:HIS10 3.5 10.3 1.0
CD2 D:HIS10 4.0 13.1 1.0
CD2 F:HIS10 4.0 11.5 1.0
CB F:LEU6 4.0 12.9 1.0
CB D:LEU6 4.1 11.5 1.0
CD2 B:HIS10 4.2 11.7 1.0
CB B:LEU6 4.2 14.3 1.0
CG B:LEU6 4.3 20.5 1.0
O F:HOH95 4.4 40.7 1.0
CE1 D:HIS10 4.4 15.2 1.0
CD2 B:LEU6 4.4 21.8 1.0
CE1 B:HIS10 4.5 15.2 1.0
CD1 F:LEU6 4.5 18.2 1.0
CD1 D:LEU6 4.5 19.6 1.0
CE1 F:HIS10 4.7 17.6 1.0
CG D:LEU6 4.7 17.1 1.0
CG F:LEU6 4.8 13.9 1.0
O B:LEU6 4.9 10.9 1.0
O D:LEU6 4.9 13.6 1.0
C F:LEU6 4.9 10.7 1.0
O F:LEU6 4.9 12.1 1.0
CD2 D:LEU6 5.0 24.3 1.0
C B:LEU6 5.0 11.3 1.0

Chlorine binding site 2 out of 2 in 1zei

Go back to Chlorine Binding Sites List in 1zei
Chlorine binding site 2 out of 2 in the Cross-Linked B28 Asp Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cross-Linked B28 Asp Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl55

b:19.5
occ:1.00
ZN C:ZN54 2.2 14.0 1.0
NE2 C:HIS10 3.2 4.8 1.0
NE2 E:HIS10 3.5 11.9 1.0
NE2 A:HIS10 3.6 14.0 1.0
CD2 C:HIS10 3.7 6.6 1.0
O C:HOH72 3.8 41.6 1.0
CD2 E:HIS10 3.9 14.5 1.0
CB A:LEU6 4.0 23.0 1.0
CD2 A:HIS10 4.0 15.3 1.0
CB E:LEU6 4.1 21.5 1.0
CG C:LEU6 4.1 23.4 1.0
CB C:LEU6 4.1 15.3 1.0
CD1 A:LEU6 4.2 26.5 1.0
CE1 C:HIS10 4.4 19.5 1.0
CG E:LEU6 4.5 22.7 1.0
CD2 E:LEU6 4.6 29.1 1.0
CE1 E:HIS10 4.6 14.6 1.0
CG A:LEU6 4.7 24.6 1.0
O A:LEU6 4.7 17.4 1.0
CE1 A:HIS10 4.7 16.7 1.0
CD2 C:LEU6 4.8 29.1 1.0
CD1 C:LEU6 4.8 23.9 1.0
O E:LEU6 4.9 12.8 1.0
O C:LEU6 4.9 15.6 1.0
C A:LEU6 4.9 18.1 1.0

Reference:

J.L.Whittingham, D.J.Edwards, A.A.Antson, J.M.Clarkson, G.G.Dodson. Interactions of Phenol and M-Cresol in the Insulin Hexamer, and Their Effect on the Association Properties of B28 Pro --> Asp Insulin Analogues. Biochemistry V. 37 11516 1998.
ISSN: ISSN 0006-2960
PubMed: 9708987
DOI: 10.1021/BI980807S
Page generated: Sat Jul 20 04:39:21 2024

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