Atomistry » Chlorine » PDB 2q6r-2qhf » 2qf7
Atomistry »
  Chlorine »
    PDB 2q6r-2qhf »
      2qf7 »

Chlorine in PDB 2qf7: Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli

Enzymatic activity of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli

All present enzymatic activity of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli:
6.4.1.1;

Protein crystallography data

The structure of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli, PDB code: 2qf7 was solved by M.St Maurice, K.H.Surinya, I.Rayment, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 131.31 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 234.729, 93.258, 137.222, 90.00, 107.33, 90.00
R / Rfree (%) 17.8 / 22.3

Other elements in 2qf7:

The structure of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli also contains other interesting chemical elements:

Magnesium (Mg) 6 atoms
Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli (pdb code 2qf7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli, PDB code: 2qf7:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 2qf7

Go back to Chlorine Binding Sites List in 2qf7
Chlorine binding site 1 out of 4 in the Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1159

b:24.5
occ:1.00
 O A:HOH1804 3.1 35.8 1.0
N A:LYS989 3.4 23.9 1.0
C A:TYR987 3.5 23.3 1.0
N A:VAL990 3.5 22.7 1.0
CA A:TYR987 3.5 22.8 1.0
N A:PRO988 3.6 23.4 1.0
CB A:TYR987 3.7 23.3 1.0
CG2 A:VAL990 3.8 23.9 1.0
CD A:PRO988 3.9 22.5 1.0
CB A:LYS989 3.9 26.4 1.0
CD1 A:TYR987 4.0 24.1 1.0
O A:TYR987 4.0 24.1 1.0
CA A:LYS989 4.0 24.9 1.0
CB A:VAL990 4.1 22.4 1.0
CE2 A:TYR628 4.2 29.0 1.0
C A:LYS989 4.2 23.7 1.0
C A:PRO988 4.3 23.3 1.0
CG A:TYR987 4.4 22.1 1.0
CA A:VAL990 4.4 23.2 1.0
CA A:PRO988 4.5 22.9 1.0
O A:HOH1483 4.5 45.6 1.0
CG A:PRO988 4.5 23.8 1.0
CZ A:TYR628 4.7 30.5 1.0
OH A:TYR628 4.8 29.8 1.0
CD2 A:TYR628 4.8 28.2 1.0
N A:TYR987 5.0 21.9 1.0

Chlorine binding site 2 out of 4 in 2qf7

Go back to Chlorine Binding Sites List in 2qf7
Chlorine binding site 2 out of 4 in the Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1160

b:35.0
occ:1.00
 N A:GLU66 3.3 21.8 1.0
N A:ILE65 3.3 21.3 1.0
CD A:PRO64 3.6 21.1 1.0
CA A:GLY63 3.6 19.8 1.0
N A:PRO64 3.6 20.8 1.0
C A:GLY63 3.7 20.2 1.0
CB A:GLU66 3.8 22.4 1.0
CB A:ILE65 3.8 22.2 1.0
CA A:ILE65 3.9 22.2 1.0
C A:ILE65 4.1 21.3 1.0
CA A:GLU66 4.1 22.1 1.0
CG A:PRO64 4.3 21.4 1.0
C A:PRO64 4.4 20.6 1.0
O A:GLY63 4.4 19.7 1.0
CA A:PRO64 4.5 20.8 1.0
N A:GLY63 4.6 19.1 1.0
O A:HOH1840 4.6 32.1 1.0
CG1 A:ILE65 4.8 24.0 1.0
CG2 A:ILE65 4.9 23.6 1.0
CB A:PRO64 4.9 20.4 1.0
OE1 A:GLU66 5.0 24.1 1.0

Chlorine binding site 3 out of 4 in 2qf7

Go back to Chlorine Binding Sites List in 2qf7
Chlorine binding site 3 out of 4 in the Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1159

b:28.5
occ:1.00
 O B:HOH1270 2.9 30.4 1.0
N B:LYS989 3.3 25.1 1.0
N B:VAL990 3.3 23.8 1.0
C B:TYR987 3.5 24.4 1.0
CA B:TYR987 3.5 24.1 1.0
CB B:LYS989 3.5 26.6 1.0
N B:PRO988 3.6 24.4 1.0
CB B:TYR987 3.7 24.4 1.0
CA B:LYS989 3.8 25.5 1.0
CD B:PRO988 3.8 23.5 1.0
CD1 B:TYR987 3.9 21.2 1.0
CG2 B:VAL990 3.9 22.7 1.0
O B:TYR987 4.0 24.9 1.0
O B:HOH1417 4.1 47.6 1.0
CB B:VAL990 4.1 22.8 1.0
C B:LYS989 4.1 24.3 1.0
CE2 B:TYR628 4.1 27.9 1.0
C B:PRO988 4.2 25.0 1.0
CG B:TYR987 4.3 21.7 1.0
CA B:VAL990 4.3 22.8 1.0
CG B:PRO988 4.3 24.6 1.0
CA B:PRO988 4.5 24.8 1.0
CZ B:TYR628 4.6 28.7 1.0
CD2 B:TYR628 4.7 27.0 1.0
OH B:TYR628 4.7 29.1 1.0
CG B:LYS989 4.8 30.2 1.0
N B:TYR987 4.9 24.0 1.0

Chlorine binding site 4 out of 4 in 2qf7

Go back to Chlorine Binding Sites List in 2qf7
Chlorine binding site 4 out of 4 in the Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1160

b:38.8
occ:1.00
 N B:GLU66 3.4 25.6 1.0
N B:ILE65 3.4 26.1 1.0
CA B:GLY63 3.7 25.7 1.0
N B:PRO64 3.8 25.1 1.0
C B:GLY63 3.8 25.4 1.0
CD B:PRO64 3.8 24.7 1.0
CB B:GLU66 3.9 25.8 1.0
CB B:ILE65 3.9 26.6 1.0
CA B:ILE65 4.0 26.5 1.0
C B:ILE65 4.2 26.1 1.0
CA B:GLU66 4.2 25.6 1.0
CG B:PRO64 4.3 25.2 1.0
O B:GLY63 4.4 25.6 1.0
C B:PRO64 4.4 25.8 1.0
CA B:PRO64 4.5 24.9 1.0
N B:GLY63 4.6 26.7 1.0
CG1 B:ILE65 4.7 28.4 1.0
O B:HOH1759 4.7 36.5 1.0
OE1 B:GLU66 4.9 27.1 1.0
CB B:PRO64 4.9 24.6 1.0
CG2 B:ILE65 5.0 25.7 1.0

Reference:

M.St Maurice, L.Reinhardt, K.H.Surinya, P.V.Attwood, J.C.Wallace, W.W.Cleland, I.Rayment. Domain Architecture of Pyruvate Carboxylase, A Biotin-Dependent Multifunctional Enzyme Science V. 317 1076 2007.
ISSN: ISSN 0036-8075
PubMed: 17717183
DOI: 10.1126/SCIENCE.1144504
Page generated: Sat Dec 12 09:17:00 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy