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Chlorine in PDB 2wtu: Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch.

Protein crystallography data

The structure of Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch., PDB code: 2wtu was solved by G.Natrajan, J.H.Lebbink, A.Reumer, A.Fish, H.H.Winterwerp, T.K.Sixma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 3.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 91.105, 137.890, 161.446, 90.00, 90.00, 90.00
R / Rfree (%) 20.3 / 26.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch. (pdb code 2wtu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch., PDB code: 2wtu:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 2wtu

Go back to Chlorine Binding Sites List in 2wtu
Chlorine binding site 1 out of 3 in the Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1802

b:30.0
occ:1.00
ND1 A:HIS728 2.9 56.9 1.0
OG1 B:THR699 3.4 48.9 1.0
O B:GLY698 3.5 49.1 1.0
CG A:HIS728 3.5 54.9 1.0
CE1 A:HIS728 3.6 58.4 1.0
CB A:HIS728 3.9 53.0 1.0
N A:ASN616 3.9 58.7 1.0
CA A:PRO615 3.9 57.6 1.0
CA B:THR699 4.0 48.5 1.0
CB B:THR699 4.1 48.3 1.0
O A:GLY614 4.2 57.1 1.0
C A:PRO615 4.4 58.2 1.0
C B:GLY698 4.4 49.0 1.0
NE2 A:HIS728 4.4 58.6 1.0
CD2 A:HIS728 4.4 56.7 1.0
CB A:PRO615 4.6 57.6 1.0
N B:THR699 4.7 48.8 1.0
CA A:HIS728 4.9 52.4 1.0
CB A:SER770 4.9 67.1 1.0
NZ A:LYS620 4.9 52.2 1.0
N A:PRO615 5.0 57.1 1.0

Chlorine binding site 2 out of 3 in 2wtu

Go back to Chlorine Binding Sites List in 2wtu
Chlorine binding site 2 out of 3 in the Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1803

b:30.0
occ:1.00
NH1 A:ARG154 2.5 71.2 1.0
CZ A:ARG154 3.5 69.8 1.0
NH2 A:ARG156 3.8 63.5 1.0
NH2 A:ARG154 3.9 69.1 1.0
OG A:SER547 4.1 56.7 1.0
NE A:ARG154 4.6 67.4 1.0
CG A:ARG154 4.7 56.8 1.0
CD A:ARG154 5.0 61.7 1.0

Chlorine binding site 3 out of 3 in 2wtu

Go back to Chlorine Binding Sites List in 2wtu
Chlorine binding site 3 out of 3 in the Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Escherichia Coli Muts in Complex with A 16 Basepair Oligo Containing An A.A Mismatch. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1801

b:30.0
occ:1.00
CE B:LYS517 3.1 63.4 1.0
CD B:LYS517 3.7 64.3 1.0
CE2 B:PHE467 4.0 71.8 1.0
NZ B:LYS517 4.0 61.8 1.0
CZ B:PHE467 4.2 71.7 1.0
CD2 B:PHE467 4.8 71.6 1.0
CG1 B:VAL513 4.9 69.0 1.0

Reference:

J.H.Lebbink, A.Fish, A.Reumer, G.Natrajan, H.H.Winterwerp, T.K.Sixma. Magnesium Coordination Controls the Molecular Switch Function of Dna Mismatch Repair Protein Muts. J. Biol. Chem. V. 285 13131 2010.
ISSN: ESSN 1083-351X
PubMed: 20167596
DOI: 10.1074/JBC.M109.066001
Page generated: Sat Dec 12 09:24:21 2020

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