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Chlorine in PDB 2yb6: Native Human RAD6

Protein crystallography data

The structure of Native Human RAD6, PDB code: 2yb6 was solved by R.G.Hibbert, T.K.Sixma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.78 / 1.50
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 48.050, 48.050, 124.760, 90.00, 90.00, 90.00
R / Rfree (%) 16.584 / 20.538

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Native Human RAD6 (pdb code 2yb6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Native Human RAD6, PDB code: 2yb6:

Chlorine binding site 1 out of 1 in 2yb6

Go back to Chlorine Binding Sites List in 2yb6
Chlorine binding site 1 out of 1 in the Native Human RAD6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Native Human RAD6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1153

b:20.0
occ:1.00
O A:HOH2086 3.2 21.3 1.0
N A:ASP90 3.3 19.1 1.0
O A:HOH2088 3.5 28.7 1.0
ND2 A:ASN117 3.6 20.8 1.0
CD1 A:LEU89 3.9 19.6 1.0
CB A:ASP90 4.0 22.1 1.0
CA A:LEU89 4.0 17.3 1.0
CG A:ASP90 4.1 26.4 1.0
OD1 A:ASP90 4.1 30.0 1.0
C A:LEU89 4.2 17.7 1.0
CB A:ASN117 4.2 17.6 1.0
CA A:ASP90 4.2 20.6 1.0
CG A:ASN117 4.4 18.3 1.0
CD1 A:LEU112 4.4 15.7 1.0
CG A:LEU89 4.6 18.7 1.0
OD2 A:ASP90 4.8 31.5 1.0
CB A:LEU89 4.8 17.8 1.0
O A:CYS88 4.8 17.1 1.0
O A:HOH2087 4.8 38.6 1.0
O A:HOH2028 5.0 30.8 1.0

Reference:

R.G.Hibbert, A.Huang, R.Boelens, T.K.Sixma. E3 Ligase RAD18 Promotes Monoubiquitination Rather Than Ubiquitin Chain Formation By E2 Enzyme RAD6. Proc.Natl.Acad.Sci.Usa V. 108 5590 2011.
ISSN: ISSN 0027-8424
PubMed: 21422291
DOI: 10.1073/PNAS.1017516108
Page generated: Fri Jul 11 02:33:58 2025

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