Atomistry » Chlorine » PDB 3ck2-3csw » 3ck6
Atomistry »
  Chlorine »
    PDB 3ck2-3csw »
      3ck6 »

Chlorine in PDB 3ck6: Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633

Protein crystallography data

The structure of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633, PDB code: 3ck6 was solved by K.Tan, A.Sather, S.Moy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.80 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 64.390, 130.213, 79.386, 90.00, 103.41, 90.00
R / Rfree (%) 18.5 / 22.3

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 25;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 (pdb code 3ck6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 25 binding sites of Chlorine where determined in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633, PDB code: 3ck6:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 1 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl250

b:23.4
occ:1.00
O A:HOH267 3.2 27.8 1.0
N A:SER112 3.2 27.7 1.0
NE2 A:HIS32 3.2 27.0 1.0
NH1 A:ARG108 3.3 25.8 1.0
CE1 A:HIS32 3.7 26.4 1.0
CG A:ARG108 3.7 23.8 1.0
CB A:ARG108 3.8 25.7 1.0
CA A:PRO111 3.8 28.5 1.0
CD A:ARG108 3.8 23.8 1.0
CB A:SER112 3.8 27.2 1.0
C A:PRO111 4.0 28.3 1.0
CA A:SER112 4.0 27.5 1.0
CB A:ILE115 4.1 27.2 1.0
O A:SER112 4.2 27.6 1.0
CD1 A:ILE115 4.2 33.9 1.0
CG2 A:ILE115 4.2 28.2 1.0
CZ A:ARG108 4.3 26.1 1.0
CB A:PRO111 4.4 29.2 1.0
CD2 A:HIS32 4.4 25.8 1.0
NE A:ARG108 4.5 26.7 1.0
CD1 A:ILE95 4.6 34.0 1.0
C A:SER112 4.6 28.0 1.0
O A:ILE110 4.7 28.8 1.0
CG1 A:ILE115 4.8 28.4 1.0
ND1 A:HIS32 4.9 26.5 1.0
N A:PRO111 5.0 28.7 1.0
OG A:SER112 5.0 28.2 1.0

Chlorine binding site 2 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 2 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl251

b:22.8
occ:1.00
OG A:SER62 2.9 34.0 1.0
NE A:ARG79 3.0 27.7 1.0
OG A:SER94 3.1 29.2 1.0
CG2 A:ILE77 3.3 27.9 1.0
C A:ARG63 3.5 25.2 1.0
C A:SER62 3.5 28.6 1.0
CA A:ARG63 3.5 25.8 1.0
N A:ARG63 3.6 26.0 1.0
CB A:SER62 3.6 29.7 1.0
N A:PRO64 3.6 24.6 1.0
O A:SER62 3.6 27.4 1.0
CG A:ARG79 3.7 24.2 1.0
CD A:PRO64 3.7 23.6 1.0
NH2 A:ARG79 3.7 29.9 1.0
CB A:SER94 3.7 28.6 1.0
CZ A:ARG79 3.8 29.0 1.0
CD A:ARG79 3.9 26.9 1.0
O A:ARG63 4.0 24.6 1.0
CA A:SER62 4.2 30.1 1.0
CG A:PRO64 4.3 24.0 1.0
CA A:PRO64 4.4 25.2 1.0
CA A:SER94 4.6 28.4 1.0
O A:LEU78 4.6 26.5 1.0
CB A:ILE77 4.8 27.0 1.0
C A:LEU78 4.9 25.8 1.0
NE A:ARG96 5.0 28.6 1.0

Chlorine binding site 3 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 3 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl252

b:30.2
occ:1.00
O A:HOH312 2.6 32.2 1.0
OG A:SER112 3.0 28.2 1.0
N A:ALA114 3.2 26.1 1.0
CB A:ALA114 3.4 26.9 1.0
O A:HOH270 3.5 19.2 1.0
CD2 A:LEU142 3.6 34.2 1.0
N A:ARG113 3.6 27.2 1.0
CG A:LYS145 3.7 25.0 1.0
CA A:ALA114 3.9 27.1 1.0
CB A:SER112 3.9 27.2 1.0
CB A:LYS145 4.0 27.5 1.0
CA A:SER112 4.1 27.5 1.0
C A:ARG113 4.1 26.8 1.0
C A:SER112 4.1 28.0 1.0
CA A:ARG113 4.2 27.7 1.0
CB A:ARG113 4.4 28.6 1.0
O A:ILE81 4.5 27.1 1.0
CD2 A:LEU93 4.6 28.8 1.0
CG A:LEU142 4.6 31.8 1.0
CA A:LEU142 4.6 30.8 1.0
O A:GLY141 4.8 28.9 1.0
O A:HOH269 4.8 23.9 1.0
N A:ILE115 5.0 26.2 1.0
CA A:GLY80 5.0 26.3 1.0

Chlorine binding site 4 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 4 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl253

b:24.4
occ:1.00
O A:HOH343 3.0 41.0 1.0
NH1 A:ARG35 3.1 30.3 1.0
N A:SER94 3.2 28.3 1.0
N A:ILE110 3.4 28.2 1.0
O A:HOH272 3.5 19.8 1.0
CE A:LYS109 3.6 38.0 1.0
O A:SER94 3.6 29.9 1.0
CG1 A:ILE110 3.7 30.9 1.0
CB A:LYS109 3.7 28.8 1.0
CB A:ILE110 3.8 28.2 1.0
CA A:LEU93 3.8 28.2 1.0
C A:LEU93 4.0 28.6 1.0
CA A:SER94 4.1 28.4 1.0
CD1 A:ILE110 4.1 29.6 1.0
CB A:LEU93 4.2 29.1 1.0
CB A:SER94 4.2 28.6 1.0
CA A:ILE110 4.2 28.9 1.0
N A:LYS109 4.2 27.1 1.0
NZ A:LYS109 4.3 40.4 1.0
CA A:LYS109 4.3 28.0 1.0
C A:SER94 4.3 28.9 1.0
CZ A:ARG35 4.3 32.8 1.0
C A:LYS109 4.3 27.8 1.0
O A:HOH399 4.5 42.5 1.0
CG A:LYS109 4.5 29.2 1.0
CD A:LYS109 4.5 35.5 1.0
NH2 A:ARG35 4.7 32.7 1.0
O A:HOH354 4.7 45.8 1.0
O A:ILE110 4.7 28.8 1.0
O A:MSE92 4.9 27.8 1.0

Chlorine binding site 5 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 5 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl254

b:35.4
occ:1.00
NE2 A:GLN188 3.1 30.5 1.0
NE2 A:HIS213 3.1 36.3 1.0
CE1 A:HIS213 3.5 39.0 1.0
CG A:GLN188 3.7 27.7 1.0
CD A:ARG192 3.7 32.1 1.0
CB A:ARG192 3.8 28.2 1.0
CD A:GLN188 3.8 29.3 1.0
CD2 A:TYR189 4.0 37.4 1.0
CG A:ARG192 4.0 31.7 1.0
O A:GLN188 4.2 27.7 1.0
CE2 A:TYR189 4.2 39.1 1.0
CD2 A:HIS213 4.4 34.9 1.0
O A:HOH383 4.4 49.5 1.0
NH1 A:ARG192 4.4 41.0 1.0
NE A:ARG192 4.5 38.2 1.0
C A:GLN188 4.6 27.8 1.0
ND1 A:HIS213 4.8 38.0 1.0
CA A:TYR189 4.8 29.2 1.0
N A:TYR189 4.8 28.0 1.0
CZ A:ARG192 4.9 41.4 1.0
CB A:GLN188 4.9 27.6 1.0

Chlorine binding site 6 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 6 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl250

b:36.6
occ:1.00
O B:HOH287 1.9 23.6 1.0
NE2 B:HIS32 3.1 30.1 1.0
N B:SER112 3.2 34.9 1.0
NH1 B:ARG108 3.2 29.0 1.0
CE1 B:HIS32 3.5 30.1 1.0
CD B:ARG108 3.5 33.1 1.0
CA B:PRO111 3.7 37.4 1.0
CG B:ARG108 3.8 30.9 1.0
CB B:ARG108 3.8 31.7 1.0
CB B:SER112 3.9 34.8 1.0
C B:PRO111 3.9 36.4 1.0
CA B:SER112 4.1 34.7 1.0
CB B:ILE115 4.2 30.6 1.0
CD1 B:ILE115 4.2 36.5 1.0
CG2 B:ILE115 4.2 30.2 1.0
CZ B:ARG108 4.2 31.9 1.0
O B:SER112 4.3 33.0 1.0
CD2 B:HIS32 4.3 28.5 1.0
NE B:ARG108 4.3 34.0 1.0
CB B:PRO111 4.4 37.5 1.0
O B:ILE110 4.5 38.8 1.0
N B:PRO111 4.7 38.2 1.0
C B:SER112 4.7 34.1 1.0
CG1 B:ILE115 4.8 32.6 1.0
ND1 B:HIS32 4.8 29.7 1.0
C B:ILE110 5.0 38.8 1.0
OG B:SER112 5.0 35.2 1.0

Chlorine binding site 7 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 7 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl251

b:23.7
occ:1.00
NE B:ARG79 2.9 26.3 1.0
OG B:SER62 2.9 33.7 1.0
OG B:SER94 3.1 29.1 1.0
CG2 B:ILE77 3.3 27.8 1.0
C B:ARG63 3.4 26.9 1.0
N B:PRO64 3.5 26.9 1.0
CA B:ARG63 3.5 26.4 1.0
C B:SER62 3.5 27.9 1.0
N B:ARG63 3.6 25.9 1.0
CB B:SER94 3.6 29.1 1.0
CB B:SER62 3.6 29.2 1.0
NH2 B:ARG79 3.6 29.1 1.0
O B:SER62 3.6 26.8 1.0
CD B:PRO64 3.7 26.7 1.0
CZ B:ARG79 3.7 27.2 1.0
CG B:ARG79 3.7 26.8 1.0
CD B:ARG79 3.8 27.0 1.0
O B:ARG63 3.9 26.3 1.0
CA B:SER62 4.2 29.6 1.0
CG B:PRO64 4.2 26.8 1.0
CA B:PRO64 4.4 26.7 1.0
CA B:SER94 4.4 29.8 1.0
O B:LEU78 4.4 27.7 1.0
CB B:ILE77 4.8 27.1 1.0
C B:LEU78 4.8 27.7 1.0
NH1 B:ARG79 5.0 26.6 1.0

Chlorine binding site 8 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 8 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl252

b:33.8
occ:1.00
O B:HOH346 2.8 40.0 1.0
OG B:SER112 3.1 35.2 1.0
O B:HOH274 3.2 24.0 1.0
N B:ALA114 3.3 31.6 1.0
CB B:ALA114 3.5 31.9 1.0
CG B:LYS145 3.6 31.8 1.0
CD2 B:LEU142 3.6 33.1 1.0
N B:ARG113 3.7 33.3 1.0
CB B:LYS145 3.8 31.9 1.0
CA B:ALA114 4.0 31.4 1.0
CB B:SER112 4.0 34.8 1.0
C B:SER112 4.2 34.1 1.0
CA B:SER112 4.2 34.7 1.0
C B:ARG113 4.2 32.9 1.0
O B:ILE81 4.3 31.6 1.0
CA B:ARG113 4.3 33.6 1.0
CB B:ARG113 4.5 34.0 1.0
CA B:LEU142 4.6 29.8 1.0
N B:ILE81 4.7 29.6 1.0
CG B:LEU142 4.9 31.4 1.0
CA B:GLY80 4.9 28.6 1.0
CD B:LYS145 4.9 34.3 1.0
O B:HOH262 4.9 33.0 1.0
O B:GLY141 5.0 28.3 1.0

Chlorine binding site 9 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 9 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl253

b:45.4
occ:1.00
O B:HOH354 2.3 38.5 1.0
N B:SER94 3.1 30.6 1.0
O B:HOH275 3.2 23.6 1.0
CB B:LYS109 3.2 37.0 1.0
NH1 B:ARG35 3.4 32.0 1.0
CE B:LYS109 3.5 42.5 1.0
CA B:LEU93 3.6 32.8 1.0
O B:SER94 3.7 30.1 1.0
CB B:LEU93 3.7 33.7 1.0
C B:LEU93 3.8 32.1 1.0
CA B:SER94 4.1 29.8 1.0
O B:HOH361 4.1 53.8 1.0
N B:LYS109 4.1 34.2 1.0
CG B:LYS109 4.2 37.5 1.0
CA B:LYS109 4.2 36.8 1.0
CD B:LYS109 4.2 39.6 1.0
C B:SER94 4.3 28.8 1.0
CB B:SER94 4.4 29.1 1.0
N B:ILE110 4.4 38.1 1.0
CG2 B:ILE110 4.4 41.3 1.0
CZ B:ARG35 4.6 32.7 1.0
NZ B:LYS109 4.7 44.2 1.0
C B:LYS109 4.8 37.2 1.0
N B:LEU93 5.0 32.7 1.0

Chlorine binding site 10 out of 25 in 3ck6

Go back to Chlorine Binding Sites List in 3ck6
Chlorine binding site 10 out of 25 in the Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of Zntb Cytoplasmic Domain From Vibrio Parahaemolyticus Rimd 2210633 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl254

b:34.7
occ:1.00
NE2 B:GLN188 3.3 31.4 1.0
NE2 B:HIS213 3.3 37.5 1.0
CD2 B:TYR189 3.7 38.0 1.0
CE1 B:HIS213 3.7 37.8 1.0
CD B:ARG192 3.7 36.3 1.0
CG B:GLN188 3.7 26.7 1.0
CE2 B:TYR189 3.8 40.8 1.0
CB B:ARG192 3.8 30.4 1.0
CD B:GLN188 4.0 29.2 1.0
CG B:ARG192 4.1 31.5 1.0
O B:GLN188 4.2 28.9 1.0
NH1 B:ARG192 4.4 41.6 1.0
NE B:ARG192 4.4 37.9 1.0
CD2 B:HIS213 4.5 34.2 1.0
C B:GLN188 4.6 29.3 1.0
CA B:TYR189 4.7 31.2 1.0
CZ B:ARG192 4.7 40.3 1.0
CB B:GLN188 4.8 28.2 1.0
N B:TYR189 4.8 30.2 1.0
CG B:TYR189 4.9 36.8 1.0

Reference:

K.Tan, A.Sather, J.L.Robertson, S.Moy, B.Roux, A.Joachimiak. Structure and Electrostatic Property of Cytoplasmic Domain of Zntb Transporter. Protein Sci. V. 18 2043 2009.
ISSN: ISSN 0961-8368
PubMed: 19653298
DOI: 10.1002/PRO.215
Page generated: Fri Jul 11 04:05:12 2025

Last articles

Cl in 3TK1
Cl in 3TJE
Cl in 3TJA
Cl in 3TI2
Cl in 3TIX
Cl in 3TJ2
Cl in 3TJ4
Cl in 3TIK
Cl in 3TIW
Cl in 3TIV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy