Chlorine in PDB 3crr: Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel

Enzymatic activity of Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel

All present enzymatic activity of Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel:
2.5.1.8;

Protein crystallography data

The structure of Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel, PDB code: 3crr was solved by R.H.Huang, W.Xie, C.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	50.00 / 1.90
*Space group*	P 4₁
*Cell size a, b, c (Å), α, β, γ (°)*	76.230, 76.230, 57.809, 90.00, 90.00, 90.00
*R / R_free (%)*	20.9 / 23.5

Other elements in 3crr:

The structure of Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel (pdb code 3crr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel, PDB code: 3crr:

Chlorine binding site 1 out of 1 in 3crr

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Chlorine Binding Sites List in 3crr

Chlorine binding site 1 out of 1 in the Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl325 b:71.1 occ:1.00	OD1	A:ASP37	2.6	30.2	1.0
	N	A:TRS327	2.8	21.6	1.0
	O3	A:DPO326	2.9	39.7	1.0
	O	A:HOH384	3.0	30.5	1.0
	O	A:HOH397	3.1	44.7	1.0
	CD1	A:LEU40	3.3	26.1	1.0
	O	A:HOH398	3.4	34.8	1.0
	CG	A:ASP37	3.4	30.7	1.0
	CG	A:LEU40	3.6	26.4	1.0
	P1	A:DPO326	3.8	37.9	1.0
	O	A:THR49	3.8	25.3	1.0
	C	A:TRS327	3.8	21.6	1.0
	C3	A:TRS327	3.8	21.6	1.0
	O2	A:TRS327	3.9	21.6	1.0
	O1	A:DPO326	3.9	38.4	1.0
	MG	A:MG324	3.9	27.4	1.0
	O2	A:DPO326	3.9	36.2	1.0
	OD2	A:ASP37	4.0	31.7	1.0
	CD2	A:LEU40	4.0	25.5	1.0
	C2	A:TRS327	4.1	21.6	1.0
	CB	A:ASP37	4.3	28.9	1.0
	O	A:HOH425	4.8	44.0	1.0
	O	A:HOH337	4.9	35.3	1.0
	C	A:THR49	5.0	26.1	1.0

Reference:

W.Xie, C.Zhou, R.H.Huang. Structure of Trna Dimethylallyltransferase: Rna Modification Through A Channel J.Mol.Biol. V. 367 872 2007.
ISSN: ISSN 0022-2836
PubMed: 17292915
DOI: 10.1016/J.JMB.2007.01.048

Page generated: Fri Jul 11 04:13:18 2025

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