Atomistry » Chlorine » PDB 3d44-3dgc » 3d6l
Atomistry »
  Chlorine »
    PDB 3d44-3dgc »
      3d6l »

Chlorine in PDB 3d6l: Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni

Protein crystallography data

The structure of Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni, PDB code: 3d6l was solved by T.Yokoyama, H.J.Yeo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.28 / 2.59
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 103.018, 103.018, 103.018, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 26

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni (pdb code 3d6l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni, PDB code: 3d6l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3d6l

Go back to Chlorine Binding Sites List in 3d6l
Chlorine binding site 1 out of 2 in the Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:23.6
occ:1.00
ND2 A:ASN19 3.2 11.1 1.0
N A:GLY26 3.3 14.0 1.0
O A:HOH222 3.6 10.4 1.0
CD2 A:PHE25 3.8 12.6 1.0
O A:HOH218 4.0 22.6 1.0
CA A:GLY26 4.0 13.9 1.0
CG A:ASN19 4.2 11.8 1.0
CB A:ASN19 4.2 12.3 1.0
CA A:PHE25 4.2 13.7 1.0
C A:PHE25 4.2 13.8 1.0
CE2 A:PHE25 4.4 12.7 1.0
CL A:CL202 4.6 24.8 1.0
O A:ILE24 4.7 14.3 1.0
O A:HOH216 4.8 14.5 1.0
CG A:PHE25 4.9 13.0 1.0

Chlorine binding site 2 out of 2 in 3d6l

Go back to Chlorine Binding Sites List in 3d6l
Chlorine binding site 2 out of 2 in the Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of CJ0915, A Hexameric Hotdog Fold Thioesterase of Campylobacter Jejuni within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:24.8
occ:1.00
O A:HOH220 3.1 17.9 1.0
ND2 A:ASN23 3.3 14.2 1.0
ND2 A:ASN19 3.3 11.1 1.0
CB A:ASN23 4.0 15.0 1.0
CG A:ASN23 4.1 15.7 1.0
CG A:ASN19 4.3 11.8 1.0
OD1 A:ASN19 4.5 11.2 1.0
O A:HOH217 4.5 7.7 1.0
CL A:CL201 4.6 23.6 1.0
CB A:ALA21 4.7 13.2 1.0
O A:HOH209 4.7 15.7 1.0
O A:HOH216 5.0 14.5 1.0

Reference:

T.Yokoyama, K.J.Choi, A.M.Bosch, H.J.Yeo. Structure and Function of A Campylobacter Jejuni Thioesterase CJ0915, A Hexameric Hot Dog Fold Enzyme. Biochim.Biophys.Acta V.1794 1073 2009.
ISSN: ISSN 0006-3002
PubMed: 19303060
DOI: 10.1016/J.BBAPAP.2009.03.002
Page generated: Sat Jul 20 18:03:34 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy