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Chlorine in PDB 3o40: Complex of A Chimeric Alpha/Beta-Peptide Based on the GP41 Chr Domain Bound to GP41-5

Protein crystallography data

The structure of Complex of A Chimeric Alpha/Beta-Peptide Based on the GP41 Chr Domain Bound to GP41-5, PDB code: 3o40 was solved by W.S.Horne, L.M.Johnson, S.H.Gellman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 47.846, 56.968, 103.466, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of A Chimeric Alpha/Beta-Peptide Based on the GP41 Chr Domain Bound to GP41-5 (pdb code 3o40). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Complex of A Chimeric Alpha/Beta-Peptide Based on the GP41 Chr Domain Bound to GP41-5, PDB code: 3o40:

Chlorine binding site 1 out of 1 in 3o40

Go back to Chlorine Binding Sites List in 3o40
Chlorine binding site 1 out of 1 in the Complex of A Chimeric Alpha/Beta-Peptide Based on the GP41 Chr Domain Bound to GP41-5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of A Chimeric Alpha/Beta-Peptide Based on the GP41 Chr Domain Bound to GP41-5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:39.3
occ:1.00
HH12 A:ARG12 2.4 43.5 1.0
HD3 B:ARG16 2.9 28.2 1.0
HB3 A:ARG12 3.0 21.6 1.0
HD3 A:ARG12 3.0 34.5 1.0
NH1 A:ARG12 3.1 43.0 1.0
HH11 A:ARG12 3.4 43.5 1.0
HD11 B:LEU20 3.5 23.7 0.0
HG2 A:ARG12 3.7 27.7 1.0
CD A:ARG12 3.8 35.8 1.0
CB A:ARG12 3.9 21.7 1.0
CD B:ARG16 3.9 28.4 1.0
HD22 B:LEU20 3.9 23.6 0.0
HH12 B:ARG16 3.9 36.2 1.0
CG A:ARG12 4.0 26.8 1.0
O1 A:GOL199 4.1 54.0 1.0
HG2 B:ARG16 4.2 28.0 1.0
CZ A:ARG12 4.2 44.8 1.0
HO1 A:GOL199 4.2 54.1 0.0
HG3 B:ARG16 4.3 28.0 1.0
HD2 B:ARG16 4.4 28.2 1.0
CG B:ARG16 4.4 28.2 1.0
HB2 A:ARG12 4.4 21.6 1.0
CD1 B:LEU20 4.4 23.7 1.0
NH1 B:ARG16 4.4 37.7 1.0
NE A:ARG12 4.5 39.4 1.0
HD2 A:ARG12 4.6 34.5 1.0
NE B:ARG16 4.6 27.8 1.0
HD12 B:LEU20 4.7 23.7 0.0
HA A:ARG12 4.7 20.4 1.0
CD2 B:LEU20 4.7 23.8 1.0
CA A:ARG12 4.8 20.5 1.0
CZ B:ARG16 4.9 33.0 1.0
HD21 B:LEU20 4.9 23.6 0.0
HH11 B:ARG16 4.9 36.2 1.0
HG3 A:ARG12 5.0 27.7 1.0
O A:ARG12 5.0 19.1 1.0

Reference:

L.M.Johnson, W.S.Horne, S.H.Gellman. Broad Distribution of Energetically Important Contacts Across An Extended Protein Interface. J.Am.Chem.Soc. V. 133 10038 2011.
ISSN: ISSN 0002-7863
PubMed: 21644542
DOI: 10.1021/JA203358T
Page generated: Sun Jul 21 01:23:21 2024

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