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Chlorine in PDB 3p69: Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution, PDB code: 3p69 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 2.05
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 127.074, 127.074, 150.606, 90.00, 90.00, 120.00
R / Rfree (%) 18.9 / 21.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution (pdb code 3p69). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution, PDB code: 3p69:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3p69

Go back to Chlorine Binding Sites List in 3p69
Chlorine binding site 1 out of 3 in the Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl168

b:80.5
occ:1.00
O A:HOH352 3.1 57.6 1.0
N A:GLU66 3.3 34.2 1.0
O B:HOH395 3.5 70.7 1.0
CB A:GLU66 3.8 35.7 1.0
O A:HOH379 3.8 64.4 1.0
O A:HOH241 3.9 49.1 1.0
O B:HOH366 4.0 74.4 1.0
CD A:LYS65 4.0 42.6 1.0
CA A:GLU66 4.0 33.5 1.0
NZ B:LYS65 4.2 42.9 1.0
C A:LYS65 4.2 36.5 1.0
CA A:LYS65 4.2 35.2 1.0
NZ A:LYS65 4.6 56.8 1.0
O A:GLU66 4.6 39.9 1.0
CE A:LYS65 4.6 52.7 1.0
O A:GLU64 4.7 41.3 1.0
CE2 A:TYR45 4.8 42.0 1.0
CG A:LYS65 4.8 40.7 1.0
C A:GLU66 4.8 39.2 1.0

Chlorine binding site 2 out of 3 in 3p69

Go back to Chlorine Binding Sites List in 3p69
Chlorine binding site 2 out of 3 in the Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl166

b:87.4
occ:1.00
NH1 B:ARG69 3.3 67.8 1.0
N B:ASN71 3.8 44.9 1.0
CB B:ASN71 4.2 39.6 1.0
CA B:THR70 4.3 45.3 1.0
O B:ARG69 4.4 47.0 1.0
C B:THR70 4.4 48.8 1.0
O B:HOH235 4.5 53.4 1.0
CG B:ARG69 4.5 53.0 1.0
CZ B:ARG69 4.5 80.2 1.0
CA B:ASN71 4.6 43.3 1.0
O B:HOH311 4.6 65.3 1.0
CG B:ASN71 4.7 44.0 1.0
O B:ASN71 4.8 47.5 1.0
CD B:ARG69 4.9 44.3 1.0
C B:ARG69 4.9 47.5 1.0
N B:THR70 4.9 45.3 1.0
OD1 B:ASN71 5.0 42.2 1.0

Chlorine binding site 3 out of 3 in 3p69

Go back to Chlorine Binding Sites List in 3p69
Chlorine binding site 3 out of 3 in the Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Secreted Protein (BF4250) From Bacteroides Fragilis Nctc 9343 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl167

b:77.5
occ:1.00
O B:HOH392 3.1 52.0 1.0
N B:ALA115 3.2 34.2 1.0
O B:HOH254 3.5 46.0 1.0
CA B:ALA115 3.8 34.8 1.0
O B:HOH369 4.0 72.7 1.0
C B:THR114 4.2 39.1 1.0
CA B:THR114 4.2 36.1 1.0
CG2 B:THR114 4.3 40.0 1.0
NH1 B:ARG117 4.5 98.7 1.0
CB B:ALA115 4.8 36.5 1.0
CB B:THR114 4.9 45.5 1.0
C B:ALA115 4.9 37.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 10:01:47 2020

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