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Chlorine in PDB 3q4s: Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form

Enzymatic activity of Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form

All present enzymatic activity of Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form:
2.4.1.186;

Protein crystallography data

The structure of Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form, PDB code: 3q4s was solved by A.Chaikuad, D.S.Froese, W.W.Yue, E.Krysztofinska, F.Von Delft, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, C.Bountra, O.Oppermann, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.17 / 1.98
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 58.020, 101.220, 48.750, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 23.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form (pdb code 3q4s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form, PDB code: 3q4s:

Chlorine binding site 1 out of 1 in 3q4s

Go back to Chlorine Binding Sites List in 3q4s
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Glycogenin-1 (GYG1), Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl272

b:46.6
occ:0.50
O A:HOH277 2.6 48.1 1.0
O A:HOH466 3.5 45.2 1.0
N A:ILE179 3.6 24.2 1.0
CG2 A:ILE179 3.7 22.6 1.0
CB A:ILE179 4.0 26.0 1.0
CA A:ASP178 4.1 31.9 1.0
C A:ASP178 4.4 25.8 1.0
CA A:ILE179 4.4 25.8 1.0
N A:ASP178 4.5 32.6 1.0
OD2 A:ASP178 4.7 49.4 1.0

Reference:

A.Chaikuad, D.S.Froese, G.Berridge, F.Von Delft, U.Oppermann, W.W.Yue. Conformational Plasticity of Glycogenin and Its Maltosaccharide Substrate During Glycogen Biogenesis. Proc.Natl.Acad.Sci.Usa V. 108 21028 2011.
ISSN: ISSN 0027-8424
PubMed: 22160680
DOI: 10.1073/PNAS.1113921108
Page generated: Fri Jul 11 09:18:59 2025

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