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Chlorine in PDB 3qtm: Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21)

Protein crystallography data

The structure of Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21), PDB code: 3qtm was solved by D.Rispal, J.Henri, H.Van Tilbeurgh, M.Graille, B.Seraphin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.90 / 2.15
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.930, 107.840, 101.790, 90.00, 102.29, 90.00
R / Rfree (%) 17.8 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21) (pdb code 3qtm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21), PDB code: 3qtm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3qtm

Go back to Chlorine Binding Sites List in 3qtm
Chlorine binding site 1 out of 2 in the Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:64.1
occ:1.00
O A:HOH470 3.0 50.4 1.0
N A:ALA276 3.6 38.4 1.0
O A:HOH552 3.8 38.9 1.0
CA A:PRO275 3.9 36.2 1.0
C A:PRO275 4.3 40.6 1.0
CB A:ALA276 4.3 34.0 1.0
CB A:PRO275 4.4 37.4 1.0
CA A:ALA276 4.6 37.2 1.0
O A:HOH584 4.9 48.5 1.0

Chlorine binding site 2 out of 2 in 3qtm

Go back to Chlorine Binding Sites List in 3qtm
Chlorine binding site 2 out of 2 in the Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of S. Pombe Nuclear Import Adaptor NRO1 (Space Group P21) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2

b:62.0
occ:1.00
N B:ALA276 3.7 32.7 1.0
O B:HOH555 3.7 45.1 1.0
O B:HOH580 3.9 40.3 1.0
CA B:PRO275 4.1 33.6 1.0
CB B:ALA276 4.3 32.7 1.0
C B:PRO275 4.4 32.9 1.0
O B:HOH525 4.5 42.0 1.0
CB B:PRO275 4.5 32.6 1.0
CA B:ALA276 4.6 34.5 1.0

Reference:

D.Rispal, J.Henri, H.Van Tilbeurgh, M.Graille, B.Seraphin. Structural and Functional Analysis of NRO1/ETT1: A Protein Involved in Translation Termination in S. Cerevisiae and in O2-Mediated Gene Control in S. Pombe Rna V. 17 1213 2011.
ISSN: ISSN 1355-8382
PubMed: 21610214
DOI: 10.1261/RNA.2697111
Page generated: Sat Dec 12 10:05:27 2020

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