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Chlorine in PDB 3zvy: Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail

Protein crystallography data

The structure of Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail, PDB code: 3zvy was solved by N.Lallous, C.Birck, A.G.Mc Ewen, P.Legrand, J.P.Samama, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.21 / 1.95
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 42.300, 42.300, 182.700, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 22.7

Other elements in 3zvy:

The structure of Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail also contains other interesting chemical elements:

Zinc (Zn) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail (pdb code 3zvy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail, PDB code: 3zvy:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3zvy

Go back to Chlorine Binding Sites List in 3zvy
Chlorine binding site 1 out of 3 in the Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1370

b:41.9
occ:0.55
CL B:CL1370 0.0 41.9 0.6
ZN B:ZN1369 2.6 50.3 0.9
OE1 B:GLU362 3.3 43.0 1.0
NE2 B:HIS319 3.5 35.1 1.0
CE1 B:HIS319 3.8 37.5 1.0
CD B:GLU362 4.3 41.2 1.0
OE2 B:GLU362 4.6 37.3 1.0
CD2 B:HIS319 4.7 29.8 1.0
CL B:CL1370 4.8 48.4 0.5

Chlorine binding site 2 out of 3 in 3zvy

Go back to Chlorine Binding Sites List in 3zvy
Chlorine binding site 2 out of 3 in the Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1370

b:48.4
occ:0.45
CL B:CL1370 0.0 48.4 0.5
ZN B:ZN1369 2.5 50.3 0.9
O B:HOH2006 2.9 59.8 1.0
OE2 B:GLU362 3.0 37.3 1.0
NE2 B:HIS319 3.4 35.1 1.0
CD2 B:HIS319 4.0 29.8 1.0
CD B:GLU362 4.0 41.2 1.0
CE1 B:HIS319 4.1 37.5 1.0
OE1 B:GLU362 4.5 43.0 1.0
CL B:CL1370 4.8 41.9 0.6
CG B:HIS319 4.9 29.3 1.0
ND1 B:HIS319 4.9 33.0 1.0
O B:HIS319 5.0 28.5 1.0

Chlorine binding site 3 out of 3 in 3zvy

Go back to Chlorine Binding Sites List in 3zvy
Chlorine binding site 3 out of 3 in the Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Phd Finger of Human UHRF1 in Complex with Unmodified Histone H3 N- Terminal Tail within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1371

b:69.8
occ:1.00
CB B:HIS304 3.6 40.7 1.0
ND1 B:HIS304 3.9 49.0 1.0
O B:HIS304 4.2 49.2 1.0
CG B:HIS304 4.2 51.2 1.0
CA B:HIS304 4.3 44.0 1.0
O B:HOH2003 4.3 29.0 1.0
C B:HIS304 4.4 45.3 1.0
NH1 B:ARG311 4.6 81.5 1.0

Reference:

N.Lallous, P.Legrand, A.G.Mcewen, S.Ramon-Maiques, J.P.Samama, C.Birck. The Phd Finger of Human UHRF1 Reveals A New Subgroup of Unmethylated Histone H3 Tail Readers. Plos One V. 6 27599 2011.
ISSN: ESSN 1932-6203
PubMed: 22096602
DOI: 10.1371/JOURNAL.PONE.0027599
Page generated: Sat Dec 12 10:22:14 2020

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