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Chlorine in PDB 4dyn: Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound

Protein crystallography data

The structure of Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound, PDB code: 4dyn was solved by H.A.Lewis, E.T.Baldwin, S.Steinbacher, K.Maskos, M.Mortl, R.Kiefersauer, S.Edavettal, P.A.Mcdonnell, B.C.Pearce, D.R.Langley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.90 / 2.40
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 145.610, 145.610, 145.610, 90.00, 90.00, 90.00
R / Rfree (%) 24.2 / 29.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound (pdb code 4dyn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound, PDB code: 4dyn:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4dyn

Go back to Chlorine Binding Sites List in 4dyn
Chlorine binding site 1 out of 2 in the Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:31.2
occ:1.00
CL4 A:0MR601 0.0 31.2 1.0
C17 A:0MR601 1.7 31.1 1.0
C9 A:0MR601 2.6 31.1 1.0
C13 A:0MR601 2.8 31.2 1.0
OH B:TYR52 3.0 29.4 1.0
N31 A:0MR601 3.1 31.0 1.0
C24 A:0MR601 3.4 30.3 1.0
CZ B:TYR52 3.6 29.3 1.0
CB A:ASN309 3.8 31.3 1.0
C15 A:0MR601 4.0 31.2 1.0
CD1 A:LEU306 4.0 28.2 1.0
C8 A:0MR601 4.0 31.2 1.0
CD1 A:TYR289 4.0 31.4 1.0
CE2 B:TYR52 4.1 29.0 1.0
C26 A:0MR601 4.2 30.2 1.0
CE1 B:TYR52 4.2 28.8 1.0
CG A:TYR289 4.2 31.7 1.0
CG A:ASN309 4.4 31.4 1.0
C23 A:0MR601 4.4 30.4 1.0
OD1 A:ASN309 4.5 31.4 1.0
CE1 A:TYR289 4.5 31.3 1.0
CB A:TYR289 4.5 32.1 1.0
C14 A:0MR601 4.5 31.2 1.0
CB A:ALA284 4.6 30.8 1.0
CA A:LEU306 4.8 28.8 1.0
CD2 A:TYR289 4.8 31.7 1.0
O A:ASN309 4.8 31.4 1.0
O A:LEU306 5.0 29.2 1.0

Chlorine binding site 2 out of 2 in 4dyn

Go back to Chlorine Binding Sites List in 4dyn
Chlorine binding site 2 out of 2 in the Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Wsn/A Influenza Nucleoprotein with Bms-885838 Ligand Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:35.0
occ:1.00
CL4 B:0MR601 0.0 35.0 1.0
C17 B:0MR601 1.7 35.1 1.0
C9 B:0MR601 2.7 35.2 1.0
C13 B:0MR601 2.7 35.1 1.0
OH A:TYR52 3.0 33.4 1.0
N31 B:0MR601 3.1 35.1 1.0
C24 B:0MR601 3.3 34.7 1.0
CZ A:TYR52 3.5 33.0 1.0
CB B:ASN309 3.6 33.2 1.0
CD1 B:TYR289 3.9 33.4 1.0
CD1 B:LEU306 3.9 31.7 1.0
C15 B:0MR601 4.0 35.2 1.0
C8 B:0MR601 4.0 35.1 1.0
CE1 A:TYR52 4.1 32.9 1.0
C26 B:0MR601 4.1 34.2 1.0
CE2 A:TYR52 4.1 32.7 1.0
CG B:ASN309 4.2 33.3 1.0
CG B:TYR289 4.3 33.5 1.0
CE1 B:TYR289 4.3 33.3 1.0
C23 B:0MR601 4.4 34.7 1.0
C14 B:0MR601 4.5 35.2 1.0
CB B:TYR289 4.5 33.5 1.0
ND2 B:ASN309 4.6 33.4 1.0
O B:ASN309 4.6 33.1 1.0
CB B:ALA284 4.7 29.6 1.0
CA B:LEU306 4.8 32.0 1.0
OD1 B:ASN309 4.9 33.6 1.0
CA B:ASN309 4.9 33.1 1.0
O B:LEU306 5.0 32.1 1.0

Reference:

H.A.Lewis, E.T.Baldwin, S.Steinbacher, K.Maskos, M.Mortl, R.Kiefersauer, S.Edavettal, P.A.Mcdonnell, B.C.Pearce, D.R.Langley. To Be Determined To Be Published.
Page generated: Fri Jul 11 14:33:39 2025

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