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Chlorine in PDB 4hif: Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions

Protein crystallography data

The structure of Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions, PDB code: 4hif was solved by P.Drozdzal, M.Gilski, R.Kierzek, L.Lomozik, M.Jaskolski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.98 / 0.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 17.791, 30.907, 44.196, 90.00, 90.00, 90.00
R / Rfree (%) 9.2 / 11.3

Other elements in 4hif:

The structure of Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions (pdb code 4hif). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions, PDB code: 4hif:

Chlorine binding site 1 out of 1 in 4hif

Go back to Chlorine Binding Sites List in 4hif
Chlorine binding site 1 out of 1 in the Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with ZN2+ Ions within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl102

b:7.0
occ:1.00
ZN B:ZN101 2.2 5.2 1.0
O B:HOH233 3.4 6.1 1.0
C2' B:DG8 3.5 5.9 1.0
O6 B:DG10 3.5 5.6 1.0
N7 B:DG10 3.5 5.2 1.0
O B:HOH206 3.5 13.2 1.0
C6 B:DC9 3.8 6.0 1.0
C5 B:DG10 4.0 4.8 1.0
C6 B:DG10 4.0 4.8 1.0
O3' B:DG8 4.0 6.2 1.0
C5 B:DC9 4.1 6.3 1.0
O5' B:DC9 4.1 7.1 1.0
C5' B:DC9 4.3 6.0 1.0
C3' B:DG8 4.3 5.5 1.0
C8 B:DG10 4.5 5.3 1.0
O4' B:DC9 4.6 6.3 1.0
C1' B:DG8 4.8 5.5 1.0
P B:DC9 4.8 5.9 1.0

Reference:

P.Drozdzal, M.Gilski, R.Kierzek, L.Lomozik, M.Jaskolski. Ultrahigh-Resolution Crystal Structures of Z-Dna in Complex with Mn(2+) and Zn(2+) Ions. Acta Crystallogr.,Sect.D V. 69 1180 2013.
ISSN: ISSN 0907-4449
PubMed: 23695262
DOI: 10.1107/S0907444913007798
Page generated: Sat Dec 12 10:42:55 2020

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