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Chlorine in PDB 5eic: Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc

Enzymatic activity of Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc

All present enzymatic activity of Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc:
2.3.1.48;

Protein crystallography data

The structure of Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc, PDB code: 5eic was solved by J.Dong, A.Caflisch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.01 / 1.50
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 121.258, 121.258, 40.777, 90.00, 90.00, 120.00
R / Rfree (%) 17.3 / 20.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc (pdb code 5eic). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc, PDB code: 5eic:

Chlorine binding site 1 out of 1 in 5eic

Go back to Chlorine Binding Sites List in 5eic
Chlorine binding site 1 out of 1 in the Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Bromodomain of Human Crebbp in Complex with Ayc within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1201

b:46.0
occ:0.81
CL B:5J51201 0.0 46.0 0.8
C1 B:5J51201 1.8 26.3 0.8
C B:5J51201 2.7 22.4 0.8
O B:5J51201 2.8 19.5 0.8
CE2 B:PHE1111 3.1 22.3 1.0
O B:HOH1350 3.3 19.1 1.0
O B:HOH1327 3.4 21.3 1.0
CD2 B:PHE1111 3.4 18.5 1.0
O B:HOH1330 3.6 21.8 1.0
CZ B:PHE1111 3.6 19.2 1.0
CB B:ALA1164 3.8 16.1 1.0
N B:5J51201 3.8 22.3 0.8
CG1 B:VAL1174 3.9 21.8 1.0
O B:HOH1316 4.1 22.1 1.0
CG B:PHE1111 4.1 14.7 1.0
O B:PRO1110 4.2 19.1 1.0
CE1 B:PHE1111 4.3 16.6 1.0
CD1 B:PHE1111 4.5 13.9 1.0
CA B:ALA1164 4.6 15.3 1.0
CG2 B:VAL1115 4.7 25.6 1.0
C B:PRO1110 4.7 17.6 1.0
CB B:PRO1110 4.9 20.1 1.0
CA B:PHE1111 5.0 15.1 1.0

Reference:

J.Zhu, J.Dong, L.Batiste, A.Unzue, A.Dolbois, V.Pascanu, P.Sledz, C.Nevado, A.Caflisch. Binding Motifs in the Cbp Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules. Acs Med Chem Lett V. 9 929 2018.
ISSN: ISSN 1948-5875
PubMed: 30258543
DOI: 10.1021/ACSMEDCHEMLETT.8B00286
Page generated: Sat Dec 12 11:41:28 2020

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