Chlorine in PDB 5w6l: Crystal Structure of Rrsp, A Martx Toxin Effector Domain From Vibrio Vulnificus CMCP6

Protein crystallography data

The structure of Crystal Structure of Rrsp, A Martx Toxin Effector Domain From Vibrio Vulnificus CMCP6, PDB code: 5w6l was solved by G.Minasov, Z.Wawrzak, M.Biancucci, L.Shuvalova, I.Dubrovska, K.J.Satchell, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.97 / 3.45
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 247.103, 247.103, 247.103, 90.00, 90.00, 90.00
R / Rfree (%) 22.8 / 24.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Rrsp, A Martx Toxin Effector Domain From Vibrio Vulnificus CMCP6 (pdb code 5w6l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Rrsp, A Martx Toxin Effector Domain From Vibrio Vulnificus CMCP6, PDB code: 5w6l:

Chlorine binding site 1 out of 1 in 5w6l

Go back to Chlorine Binding Sites List in 5w6l
Chlorine binding site 1 out of 1 in the Crystal Structure of Rrsp, A Martx Toxin Effector Domain From Vibrio Vulnificus CMCP6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rrsp, A Martx Toxin Effector Domain From Vibrio Vulnificus CMCP6 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl4101

b:0.5
occ:1.00
N B:ASP3741 3.2 0.2 1.0
NZ B:LYS3770 3.5 0.5 1.0
CA B:PHE3740 3.8 0.6 1.0
CB B:PHE3740 3.8 0.5 1.0
CE B:LYS3770 3.8 0.5 1.0
CG B:ASP3741 3.9 0.9 1.0
OD1 B:ASP3741 4.0 0.3 1.0
CB B:ASP3741 4.0 0.4 1.0
C B:PHE3740 4.0 0.5 1.0
CA B:ASP3741 4.2 0.5 1.0
OD2 B:ASP3741 4.3 0.0 1.0
O B:ASP3741 4.8 0.5 1.0

Reference:

M.Biancucci, G.Minasov, A.Banerjee, A.Herrera, P.J.Woida, M.B.Kieffer, L.Bindu, M.Abreu-Blanco, W.F.Anderson, V.Gaponenko, A.G.Stephen, M.Holderfield, K.J.F.Satchell. The Bacterial Ras/RAP1 Site-Specific Endopeptidase Rrsp Cleaves Ras Through An Atypical Mechanism to Disrupt Ras-Erk Signaling. Sci Signal V. 11 2018.
ISSN: ESSN 1937-9145
PubMed: 30279169
DOI: 10.1126/SCISIGNAL.AAT8335
Page generated: Sat Dec 12 12:35:56 2020

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