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Chlorine in PDB 6ft2: Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine.

Protein crystallography data

The structure of Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine., PDB code: 6ft2 was solved by A.Vigouroux, S.Morera, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.62 / 1.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.410, 58.440, 101.240, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 20.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine. (pdb code 6ft2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine., PDB code: 6ft2:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6ft2

Go back to Chlorine Binding Sites List in 6ft2
Chlorine binding site 1 out of 3 in the Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:91.6
occ:1.00
NZ A:LYS44 3.5 81.1 1.0
O A:HOH508 3.9 36.8 1.0
C A:GLN42 3.9 23.4 1.0
C A:VAL43 4.0 22.1 1.0
O A:GLN42 4.0 24.0 1.0
O A:VAL43 4.1 21.3 1.0
N A:VAL43 4.1 19.2 1.0
N A:LYS44 4.4 19.1 1.0
CA A:GLN42 4.4 20.1 1.0
CA A:VAL43 4.4 18.9 1.0
CG A:LYS44 4.4 39.7 1.0
O A:HOH504 4.4 29.4 1.0
O A:HOH444 4.5 32.1 1.0
CE A:LYS44 4.5 71.9 1.0
CD A:LYS44 4.8 56.5 1.0
CA A:LYS44 4.9 18.8 1.0

Chlorine binding site 2 out of 3 in 6ft2

Go back to Chlorine Binding Sites List in 6ft2
Chlorine binding site 2 out of 3 in the Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:59.9
occ:1.00
NH1 A:ARG218 3.0 24.6 0.5
NH2 A:ARG218 3.2 22.6 0.5
CZ A:ARG218 3.5 39.0 0.5
O A:HOH513 3.7 45.9 1.0
C2 A:EDO302 3.8 62.5 1.0
O2 A:EDO302 3.9 63.2 1.0
OH A:TYR236 4.6 20.7 1.0
NH1 A:ARG218 4.8 22.6 0.5
NE A:ARG218 4.9 28.5 0.5
NE A:ARG218 5.0 15.1 0.5

Chlorine binding site 3 out of 3 in 6ft2

Go back to Chlorine Binding Sites List in 6ft2
Chlorine binding site 3 out of 3 in the Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of the Periplasmic Binding Protein Lao-Q122A in Complex with Arginine. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:99.4
occ:1.00
O A:HOH547 2.9 38.4 1.0
O2 A:EDO301 2.9 30.0 1.0
O A:PHE26 3.2 14.1 1.0
O A:HOH481 3.7 47.0 1.0
O A:HOH466 3.8 20.9 1.0
N A:PHE26 3.8 12.9 1.0
CB A:GLU25 4.1 18.1 1.0
C A:PHE26 4.2 13.0 1.0
C2 A:EDO301 4.3 31.3 1.0
CA A:PHE26 4.4 13.3 1.0
C A:GLU25 4.5 15.1 1.0
CB A:PHE26 4.6 15.3 1.0
CA A:GLU25 4.6 14.8 1.0
CG2 A:ILE31 4.7 13.7 1.0
CG A:GLU25 4.8 34.7 1.0

Reference:

A.Vigouroux, S.Morera. Structure of the Periplasmic Binding Protein Lao-Q122A A in Complex with Arginin To Be Published.
Page generated: Sat Jul 27 23:33:06 2024

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