Atomistry » Chlorine » PDB 6hzw-6i62 » 6i29
Atomistry »
  Chlorine »
    PDB 6hzw-6i62 »
      6i29 »

Chlorine in PDB 6i29: X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution

Protein crystallography data

The structure of X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution, PDB code: 6i29 was solved by J.Kallen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.27 / 2.10
Space group I 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 121.883, 121.883, 121.883, 90.00, 90.00, 90.00
R / Rfree (%) 24.3 / 27.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution (pdb code 6i29). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution, PDB code: 6i29:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6i29

Go back to Chlorine Binding Sites List in 6i29
Chlorine binding site 1 out of 2 in the X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:40.9
occ:1.00
CL1 A:H0W201 0.0 40.9 1.0
C8 A:H0W201 1.7 37.2 1.0
C6 A:H0W201 2.7 37.0 1.0
C9 A:H0W201 2.7 37.1 1.0
CG2 A:ILE99 3.7 40.2 1.0
ND1 A:HIS96 3.7 47.6 1.0
CG A:HIS96 3.7 46.7 1.0
CA A:HIS96 3.7 46.1 1.0
CZ A:TYR100 3.7 45.3 1.0
O A:HIS96 3.7 46.0 1.0
CB A:ILE99 3.8 41.0 1.0
CB A:HIS96 3.8 46.4 1.0
CE1 A:TYR100 3.9 45.2 1.0
OH A:TYR100 4.0 48.0 1.0
C4 A:H0W201 4.0 36.5 1.0
C2 A:H0W201 4.0 36.6 1.0
CE2 A:TYR100 4.0 45.7 1.0
CD1 A:ILE99 4.1 38.2 1.0
CD1 A:LEU54 4.2 35.6 1.0
C A:HIS96 4.2 46.1 1.0
CE1 A:HIS96 4.3 46.9 1.0
CD2 A:HIS96 4.3 47.1 1.0
CD1 A:TYR100 4.4 44.1 1.0
CD2 A:TYR100 4.5 44.6 1.0
CG1 A:ILE99 4.5 40.4 1.0
C3 A:H0W201 4.5 36.5 1.0
NE2 A:HIS96 4.6 47.5 1.0
CG A:TYR100 4.7 43.1 1.0
CG A:LEU54 4.8 33.3 1.0
N A:TYR100 4.9 41.6 1.0
N A:HIS96 4.9 46.1 1.0
CA A:ILE99 5.0 41.2 1.0

Chlorine binding site 2 out of 2 in 6i29

Go back to Chlorine Binding Sites List in 6i29
Chlorine binding site 2 out of 2 in the X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Structure of the P53-MDM2 Inhibitor NMI801 Bound to HDM2 at 2.1A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:32.5
occ:1.00
CL3 A:H0W201 0.0 32.5 1.0
C30 A:H0W201 1.7 31.6 1.0
C28 A:H0W201 2.7 32.2 1.0
C31 A:H0W201 2.7 31.2 1.0
CD1 A:ILE61 3.8 27.1 1.0
CG2 A:ILE99 3.9 40.2 1.0
CD1 A:LEU57 3.9 29.4 1.0
CE2 A:PHE86 3.9 33.1 1.0
C24 A:H0W201 4.0 33.0 1.0
CB A:LEU57 4.0 29.7 1.0
C26 A:H0W201 4.0 33.1 1.0
CZ A:PHE86 4.1 33.5 1.0
CZ A:PHE91 4.1 30.4 1.0
CE1 A:PHE91 4.3 29.7 1.0
C25 A:H0W201 4.5 32.5 1.0
CG A:LEU57 4.5 29.4 1.0
CD1 A:LEU54 4.6 35.6 1.0
CD1 A:ILE99 4.8 38.2 1.0
CD2 A:LEU57 4.8 31.3 1.0
CG1 A:ILE99 4.9 40.4 1.0

Reference:

J.Ornstein, Y.Iwamoto, M.Prytyskach, M.Miller, J.Kallen, S.Ferretti, P.Holzer, W.Forrester, R.Weissleder, G.Lahav. P53 Dynamics Vary Between Tissues and Are Linked with Radiation Sensitivity To Be Published.
Page generated: Sun Jul 28 01:31:50 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy