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Chlorine in PDB 6pf1: Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa

Enzymatic activity of Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa

All present enzymatic activity of Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa:
2.3.1.48;

Protein crystallography data

The structure of Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa, PDB code: 6pf1 was solved by A.S.Gardberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 70.69 / 2.32
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.062, 90.634, 112.950, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 24.7

Other elements in 6pf1:

The structure of Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa also contains other interesting chemical elements:

Fluorine (F) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa (pdb code 6pf1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa, PDB code: 6pf1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6pf1

Go back to Chlorine Binding Sites List in 6pf1
Chlorine binding site 1 out of 2 in the Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1702

b:36.5
occ:1.00
CL1 A:OJ71702 0.0 36.5 1.0
C14 A:OJ71702 1.7 34.2 1.0
C13 A:OJ71702 2.7 33.6 1.0
C10 A:OJ71702 2.7 32.5 1.0
C3 A:OJ71702 3.1 28.0 1.0
C1 A:OJ71702 3.4 29.3 1.0
C2 A:OJ71702 3.4 27.4 1.0
CE2 A:TRP1509 3.5 34.5 1.0
NE1 A:TRP1509 3.6 34.8 1.0
CG2 A:ILE1486 3.7 32.8 1.0
CD2 A:TRP1509 3.8 32.8 1.0
CD1 A:ILE1486 3.8 34.4 1.0
CD2 A:LEU1501 3.9 36.1 1.0
CD1 A:TRP1509 3.9 33.5 1.0
CZ2 A:TRP1509 4.0 32.7 1.0
CB A:ILE1486 4.0 32.8 1.0
C12 A:OJ71702 4.0 38.6 1.0
N2 A:OJ71702 4.0 33.4 1.0
CG A:TRP1509 4.0 31.6 1.0
SD A:MET1588 4.0 44.4 1.0
C4 A:OJ71702 4.2 25.3 1.0
CG A:MET1588 4.3 44.4 1.0
N1 A:OJ71702 4.4 27.9 1.0
C11 A:OJ71702 4.5 34.5 1.0
CE3 A:TRP1509 4.5 32.9 1.0
CG1 A:ILE1486 4.5 33.6 1.0
CD1 A:LEU1501 4.5 36.8 1.0
CH2 A:TRP1509 4.5 33.8 1.0
CZ3 A:TRP1509 4.8 33.2 1.0
CG A:LEU1501 4.8 35.8 1.0
C5 A:OJ71702 4.9 25.8 1.0
CB A:TRP1509 4.9 30.9 1.0

Chlorine binding site 2 out of 2 in 6pf1

Go back to Chlorine Binding Sites List in 6pf1
Chlorine binding site 2 out of 2 in the Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the P300 Acetyltransferase Domain with Allosteric Inhibitor Cpi-090 and Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1702

b:42.1
occ:1.00
CL1 B:OJ71702 0.0 42.1 1.0
C14 B:OJ71702 1.7 38.5 1.0
C13 B:OJ71702 2.7 38.1 1.0
C10 B:OJ71702 2.7 34.9 1.0
C3 B:OJ71702 3.1 31.1 1.0
C1 B:OJ71702 3.2 31.1 1.0
C2 B:OJ71702 3.3 31.1 1.0
CE2 B:TRP1509 3.6 43.0 1.0
NE1 B:TRP1509 3.8 43.0 1.0
CG2 B:ILE1486 3.8 32.2 1.0
CD1 B:ILE1486 3.8 36.0 1.0
CD2 B:TRP1509 3.8 41.2 1.0
N2 B:OJ71702 4.0 36.4 1.0
C12 B:OJ71702 4.0 39.6 1.0
CZ2 B:TRP1509 4.0 42.2 1.0
CD1 B:TRP1509 4.1 40.8 1.0
CG B:TRP1509 4.1 41.3 1.0
CB B:ILE1486 4.1 33.2 1.0
SD B:MET1588 4.2 50.4 1.0
C4 B:OJ71702 4.2 30.1 1.0
CD2 B:LEU1501 4.4 41.4 1.0
CE3 B:TRP1509 4.4 39.6 1.0
N1 B:OJ71702 4.4 30.5 1.0
C11 B:OJ71702 4.4 34.8 1.0
CH2 B:TRP1509 4.5 39.1 1.0
CG B:MET1588 4.5 46.6 1.0
CG1 B:ILE1486 4.6 36.1 1.0
CZ3 B:TRP1509 4.7 37.8 1.0
CD1 B:LEU1501 4.7 45.0 1.0
C5 B:OJ71702 4.9 28.3 1.0
CG B:LEU1501 4.9 42.3 1.0

Reference:

A.S.Gardberg, A.J.Huhn, R.Cummings, A.Bommi-Reddy, F.Poy, J.Setser, V.Vivat, F.Brucelle, J.Wilson. Make the Right Measurement: Discovery of An Allosteric Inhibition Site For P300-Hat. Struct Dyn. V. 6 54702 2019.
ISSN: ESSN 2329-7778
PubMed: 31649965
DOI: 10.1063/1.5119336
Page generated: Mon Jul 29 13:19:12 2024

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