Chlorine in PDB 6xrs: Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp

The structure of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp, PDB code: 6xrs was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.98 / 2.80
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	138.160, 139.640, 127.000, 90.00, 90.00, 90.00
R / Rfree (%)	20.3 / 23.5

The structure of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp also contains other interesting chemical elements:

Iodine

(I)

4 atoms

The binding sites of Chlorine atom in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp (pdb code 6xrs). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp, PDB code: 6xrs:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl603 b:52.1 occ:1.00 CG1 A:VAL62 3.7 57.1 1.0 NH2 A:ARG36 3.7 78.8 1.0 CG2 A:VAL62 4.1 57.7 1.0 CD A:ARG36 4.2 60.8 1.0 CG A:ARG36 4.4 58.1 1.0 CB A:TYR168 4.5 60.9 1.0 N A:TYR168 4.5 57.5 1.0 CG1 A:VAL167 4.5 50.5 1.0 CB A:VAL62 4.5 62.5 1.0 CB A:VAL167 4.6 52.1 1.0 CA A:TYR168 4.7 57.5 1.0 CZ A:ARG36 4.8 78.6 1.0 O A:GLY164 4.8 69.2 1.0 NE A:ARG36 4.9 76.1 1.0 CA A:GLY164 5.0 69.6 1.0

Chlorine binding site 2 out of 5 in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl604 b:42.9 occ:1.00 N B:GLY166 3.1 48.8 1.0 CA B:GLY166 3.6 47.1 1.0 O B:HOH710 4.0 42.8 1.0 CD2 B:TYR169 4.0 49.2 1.0 CE2 B:TYR169 4.1 49.0 1.0 C B:ASP165 4.2 46.6 1.0 CA B:ASP165 4.3 45.0 1.0 O B:GLY164 4.5 46.7 1.0 C B:GLY166 4.6 44.3 1.0 N B:VAL167 5.0 45.7 1.0

Chlorine binding site 3 out of 5 in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl604 b:62.5 occ:1.00 NZ C:LYS371 3.3 62.1 1.0 CD C:PRO368 3.8 43.1 1.0 CD1 C:PHE434 4.0 35.2 1.0 CD C:LYS371 4.0 55.3 1.0 CE1 C:PHE434 4.1 40.5 1.0 O C:LYS366 4.2 46.0 1.0 CE C:LYS371 4.3 54.3 1.0 CA C:MET367 4.5 39.9 1.0 CD1 C:ILE365 4.5 30.4 1.0 CG C:MET367 4.7 35.6 1.0 CG C:PRO368 4.7 47.2 1.0 CG1 C:ILE365 4.8 31.1 1.0 CB C:MET367 5.0 36.7 1.0 N C:PRO368 5.0 38.7 1.0

Chlorine binding site 4 out of 5 in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl605 b:47.4 occ:1.00 CG C:GLU271 3.2 53.9 1.0 NE2 C:HIS59 3.3 55.0 1.0 CB C:GLU271 3.6 44.4 1.0 CA C:GLU271 3.6 44.6 1.0 CD2 C:HIS59 3.9 51.5 1.0 CB C:ALA300 4.0 34.8 1.0 CZ C:PHE68 4.0 55.3 1.0 CE1 C:PHE68 4.1 53.6 1.0 NZ C:LYS17 4.2 70.0 1.0 NH2 C:ARG302 4.2 34.7 1.0 N C:GLU271 4.3 36.8 1.0 CE C:LYS17 4.3 70.6 1.0 CD C:GLU271 4.5 78.5 1.0 CE1 C:HIS59 4.5 47.7 1.0 C C:GLU271 4.8 43.2 1.0 C C:VAL270 4.9 39.0 1.0 CA C:ALA300 4.9 31.5 1.0 O C:GLU271 4.9 42.0 1.0 CZ C:PHE296 5.0 44.1 1.0 OE2 C:GLU271 5.0 83.2 1.0

Chlorine binding site 5 out of 5 in the Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl603 b:26.6 occ:1.00 NZ D:LYS17 3.3 63.8 1.0 NE2 D:HIS59 3.7 46.9 1.0 CG D:GLU271 3.8 46.5 1.0 CZ D:PHE68 3.9 46.1 1.0 CB D:ALA300 4.0 31.7 1.0 CE1 D:PHE68 4.0 48.0 1.0 CA D:GLU271 4.0 46.5 1.0 CB D:GLU271 4.1 48.9 1.0 CD2 D:HIS59 4.2 46.1 1.0 NH2 D:ARG302 4.2 40.9 1.0 CE D:LYS17 4.3 65.9 1.0 N D:GLU271 4.5 39.1 1.0 CE1 D:HIS59 4.9 40.8 1.0 CA D:ALA300 4.9 32.8 1.0 CG1 D:VAL270 5.0 37.3 1.0

T.E.Edwards, J.Abendroth, D.D.Lorimer, P.S.Horanyi, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Gtp-Binding Protein Enga (Der Homolog) From Neisseria Gonorrhoeae Bound to Gdp To Be Published.