Chlorine in PDB 6znu: Maeb Pta Domain E544R Mutant
Enzymatic activity of Maeb Pta Domain E544R Mutant
All present enzymatic activity of Maeb Pta Domain E544R Mutant:
1.1.1.40;
Protein crystallography data
The structure of Maeb Pta Domain E544R Mutant, PDB code: 6znu
was solved by
A.L.Lovering,
C.J.Harding,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
56.86 /
2.33
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
129.09,
182.85,
119.66,
90,
117.69,
90
|
R / Rfree (%)
|
19.6 /
23.6
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Maeb Pta Domain E544R Mutant
(pdb code 6znu). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Maeb Pta Domain E544R Mutant, PDB code: 6znu:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 6znu
Go back to
Chlorine Binding Sites List in 6znu
Chlorine binding site 1 out
of 6 in the Maeb Pta Domain E544R Mutant
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Maeb Pta Domain E544R Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl802
b:47.4
occ:1.00
|
N
|
A:TYR576
|
3.2
|
39.3
|
1.0
|
NE2
|
G:GLN683
|
3.5
|
40.2
|
1.0
|
C2P
|
A:ACO801
|
3.7
|
57.7
|
1.0
|
CB
|
A:ASN575
|
3.7
|
49.9
|
1.0
|
CA
|
A:ASN575
|
3.7
|
46.2
|
1.0
|
CB
|
A:TYR576
|
3.8
|
40.1
|
1.0
|
C
|
A:ASN575
|
4.0
|
42.4
|
1.0
|
CA
|
A:TYR576
|
4.1
|
43.3
|
1.0
|
O
|
A:ACO801
|
4.2
|
58.3
|
1.0
|
C
|
A:ACO801
|
4.6
|
55.0
|
1.0
|
S1P
|
A:ACO801
|
4.6
|
58.0
|
1.0
|
CD
|
G:GLN683
|
4.6
|
51.1
|
1.0
|
CB
|
A:ARG749
|
4.8
|
51.9
|
1.0
|
ND2
|
G:ASN651
|
4.9
|
44.0
|
1.0
|
OE1
|
G:GLN683
|
4.9
|
40.2
|
1.0
|
CG
|
A:ASN575
|
4.9
|
47.7
|
1.0
|
C3P
|
A:ACO801
|
5.0
|
51.8
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 6znu
Go back to
Chlorine Binding Sites List in 6znu
Chlorine binding site 2 out
of 6 in the Maeb Pta Domain E544R Mutant
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Maeb Pta Domain E544R Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl803
b:50.9
occ:1.00
|
N
|
G:TYR576
|
3.2
|
40.0
|
1.0
|
NE2
|
A:GLN683
|
3.5
|
44.8
|
1.0
|
C2P
|
G:ACO801
|
3.7
|
72.9
|
1.0
|
CB
|
G:ASN575
|
3.7
|
52.8
|
1.0
|
CB
|
G:TYR576
|
3.8
|
38.7
|
1.0
|
CA
|
G:ASN575
|
3.8
|
58.4
|
1.0
|
O
|
G:ACO801
|
4.1
|
71.4
|
1.0
|
C
|
G:ASN575
|
4.1
|
50.3
|
1.0
|
CA
|
G:TYR576
|
4.2
|
42.6
|
1.0
|
C
|
G:ACO801
|
4.5
|
73.9
|
1.0
|
S1P
|
G:ACO801
|
4.5
|
75.2
|
1.0
|
CD
|
A:GLN683
|
4.5
|
51.4
|
1.0
|
OE1
|
A:GLN683
|
4.7
|
45.0
|
1.0
|
CB
|
G:ARG749
|
4.8
|
50.9
|
1.0
|
C3P
|
G:ACO801
|
5.0
|
70.9
|
1.0
|
CG
|
G:ASN575
|
5.0
|
54.3
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 6znu
Go back to
Chlorine Binding Sites List in 6znu
Chlorine binding site 3 out
of 6 in the Maeb Pta Domain E544R Mutant
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Maeb Pta Domain E544R Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl802
b:49.0
occ:1.00
|
N
|
B:TYR576
|
3.2
|
38.9
|
1.0
|
NE2
|
C:GLN683
|
3.4
|
31.9
|
1.0
|
CB
|
B:TYR576
|
3.7
|
39.5
|
1.0
|
CB
|
B:ASN575
|
3.8
|
50.4
|
1.0
|
CA
|
B:ASN575
|
3.8
|
50.2
|
1.0
|
O
|
B:ACO801
|
3.9
|
48.2
|
1.0
|
C
|
B:ASN575
|
4.0
|
54.5
|
1.0
|
CA
|
B:TYR576
|
4.1
|
39.7
|
1.0
|
C
|
B:ACO801
|
4.3
|
49.6
|
1.0
|
S1P
|
B:ACO801
|
4.4
|
52.2
|
1.0
|
CD
|
C:GLN683
|
4.5
|
44.5
|
1.0
|
C2P
|
B:ACO801
|
4.7
|
58.0
|
1.0
|
CB
|
B:ARG749
|
4.7
|
41.9
|
1.0
|
ND2
|
C:ASN651
|
4.8
|
42.4
|
1.0
|
OE1
|
C:GLN683
|
4.8
|
48.6
|
1.0
|
N4P
|
B:ACO801
|
4.9
|
58.4
|
1.0
|
CG
|
B:ASN575
|
5.0
|
56.7
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 6znu
Go back to
Chlorine Binding Sites List in 6znu
Chlorine binding site 4 out
of 6 in the Maeb Pta Domain E544R Mutant
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Maeb Pta Domain E544R Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl802
b:59.7
occ:1.00
|
N
|
C:TYR576
|
3.3
|
36.3
|
1.0
|
NE2
|
B:GLN683
|
3.5
|
47.8
|
1.0
|
CB
|
C:ASN575
|
3.7
|
48.7
|
1.0
|
C2P
|
C:ACO801
|
3.7
|
64.4
|
1.0
|
CB
|
C:TYR576
|
3.8
|
44.4
|
1.0
|
CA
|
C:ASN575
|
3.9
|
48.8
|
1.0
|
C
|
C:ASN575
|
4.1
|
45.4
|
1.0
|
CA
|
C:TYR576
|
4.2
|
41.6
|
1.0
|
O
|
C:ACO801
|
4.3
|
64.8
|
1.0
|
S1P
|
C:ACO801
|
4.5
|
68.4
|
1.0
|
C
|
C:ACO801
|
4.6
|
68.8
|
1.0
|
CD
|
B:GLN683
|
4.7
|
54.4
|
1.0
|
ND2
|
B:ASN651
|
4.8
|
45.8
|
1.0
|
CB
|
C:ARG749
|
4.8
|
50.5
|
1.0
|
CG
|
C:ASN575
|
4.9
|
53.0
|
1.0
|
O5P
|
C:ACO801
|
5.0
|
64.9
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 6znu
Go back to
Chlorine Binding Sites List in 6znu
Chlorine binding site 5 out
of 6 in the Maeb Pta Domain E544R Mutant
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Maeb Pta Domain E544R Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl802
b:52.1
occ:1.00
|
NE2
|
E:GLN683
|
3.3
|
49.9
|
1.0
|
N
|
D:TYR576
|
3.3
|
35.1
|
1.0
|
C2P
|
D:ACO801
|
3.7
|
52.0
|
1.0
|
CB
|
D:TYR576
|
3.8
|
35.1
|
1.0
|
CB
|
D:ASN575
|
3.9
|
43.5
|
1.0
|
CA
|
D:ASN575
|
4.0
|
45.5
|
1.0
|
C
|
D:ASN575
|
4.2
|
44.5
|
1.0
|
CA
|
D:TYR576
|
4.2
|
33.6
|
1.0
|
O
|
D:ACO801
|
4.2
|
58.4
|
1.0
|
S1P
|
D:ACO801
|
4.3
|
60.1
|
1.0
|
C
|
D:ACO801
|
4.4
|
60.2
|
1.0
|
CD
|
E:GLN683
|
4.4
|
50.5
|
1.0
|
OE1
|
E:GLN683
|
4.8
|
47.0
|
1.0
|
CB
|
D:ARG749
|
4.8
|
43.8
|
1.0
|
ND2
|
E:ASN651
|
4.8
|
38.3
|
1.0
|
O5P
|
D:ACO801
|
4.9
|
61.4
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 6znu
Go back to
Chlorine Binding Sites List in 6znu
Chlorine binding site 6 out
of 6 in the Maeb Pta Domain E544R Mutant
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Maeb Pta Domain E544R Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl802
b:65.9
occ:1.00
|
N
|
E:TYR576
|
3.4
|
48.6
|
1.0
|
C2P
|
E:ACO801
|
3.4
|
91.2
|
1.0
|
CH3
|
E:ACO801
|
3.5
|
93.3
|
1.0
|
NE2
|
D:GLN683
|
3.6
|
39.0
|
1.0
|
CB
|
E:TYR576
|
3.7
|
56.2
|
1.0
|
CB
|
E:ASN575
|
3.8
|
61.8
|
1.0
|
S1P
|
E:ACO801
|
3.9
|
94.9
|
1.0
|
C
|
E:ACO801
|
4.1
|
94.6
|
1.0
|
CA
|
E:ASN575
|
4.1
|
58.8
|
1.0
|
CA
|
E:TYR576
|
4.2
|
54.3
|
1.0
|
C
|
E:ASN575
|
4.3
|
54.4
|
1.0
|
O5P
|
E:ACO801
|
4.6
|
98.8
|
1.0
|
CD
|
D:GLN683
|
4.6
|
47.4
|
1.0
|
C3P
|
E:ACO801
|
4.8
|
89.6
|
1.0
|
OE1
|
D:GLN683
|
4.9
|
51.5
|
1.0
|
CG
|
E:ASN575
|
4.9
|
68.2
|
1.0
|
|
Reference:
A.L.Lovering,
C.J.Harding.
A Rotary Mechanism For Allostery in Bacterial Hybrid Malic Enzymes To Be Published.
Page generated: Mon Jul 29 18:07:16 2024
|