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Chlorine in PDB 8d5h: Crystal Structure of Dihydropteroate Synthase (Folp-SMZ_B27) From Soil Uncultured Bacterium in Complex with 6-Hydroxymethyl-7,8- Dihydropterin

Protein crystallography data

The structure of Crystal Structure of Dihydropteroate Synthase (Folp-SMZ_B27) From Soil Uncultured Bacterium in Complex with 6-Hydroxymethyl-7,8- Dihydropterin, PDB code: 8d5h was solved by P.J.Stogios, T.Skarina, J.Osipiuk, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.85 / 1.72
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.781, 101.781, 207.212, 90, 90, 120
R / Rfree (%) 15.4 / 18.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Dihydropteroate Synthase (Folp-SMZ_B27) From Soil Uncultured Bacterium in Complex with 6-Hydroxymethyl-7,8- Dihydropterin (pdb code 8d5h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Dihydropteroate Synthase (Folp-SMZ_B27) From Soil Uncultured Bacterium in Complex with 6-Hydroxymethyl-7,8- Dihydropterin, PDB code: 8d5h:

Chlorine binding site 1 out of 1 in 8d5h

Go back to Chlorine Binding Sites List in 8d5h
Chlorine binding site 1 out of 1 in the Crystal Structure of Dihydropteroate Synthase (Folp-SMZ_B27) From Soil Uncultured Bacterium in Complex with 6-Hydroxymethyl-7,8- Dihydropterin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Dihydropteroate Synthase (Folp-SMZ_B27) From Soil Uncultured Bacterium in Complex with 6-Hydroxymethyl-7,8- Dihydropterin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl307

b:65.7
occ:1.00
O A:HOH566 2.5 50.3 1.0
O A:HOH513 3.1 34.0 1.0
NE A:ARG122 3.3 39.1 1.0
NH2 A:ARG122 3.7 34.7 1.0
CZ A:ARG122 4.0 41.6 1.0
NE A:ARG94 4.2 49.2 1.0
O A:HOH425 4.3 51.1 1.0
CD A:ARG122 4.3 38.3 1.0
CB A:ARG122 4.4 32.3 1.0
CD A:ARG94 4.4 39.1 1.0
CG A:ARG94 4.5 29.5 1.0
CA A:VAL119 4.6 23.6 1.0
CG2 A:VAL119 4.6 26.2 1.0
O A:HOH630 4.8 37.8 1.0
O A:VAL119 4.9 25.1 1.0
CG A:ARG122 5.0 37.0 1.0
CB A:VAL119 5.0 28.6 1.0

Reference:

P.J.Stogios, P.J.Stogios, T.Skarina, J.Osipiuk, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.
Page generated: Sun Jul 13 10:33:31 2025

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