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Chlorine in PDB 2oe9: High-Pressure Structure of Pseudo-Wt T4 Lysozyme

Enzymatic activity of High-Pressure Structure of Pseudo-Wt T4 Lysozyme

All present enzymatic activity of High-Pressure Structure of Pseudo-Wt T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of High-Pressure Structure of Pseudo-Wt T4 Lysozyme, PDB code: 2oe9 was solved by M.D.Collins, M.L.Quillin, B.W.Matthews, S.M.Gruner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.41 / 2.01
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.554, 60.554, 95.567, 90.00, 90.00, 120.00
R / Rfree (%) 16 / 21

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme (pdb code 2oe9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme, PDB code: 2oe9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2oe9

Go back to Chlorine Binding Sites List in 2oe9
Chlorine binding site 1 out of 2 in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Pressure Structure of Pseudo-Wt T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl173

b:35.9
occ:1.00
O X:HOH935 2.7 33.9 1.0
N X:ARG145 3.0 9.4 1.0
N X:ASN144 3.4 10.8 1.0
C X:THR142 3.5 9.9 1.0
CB X:ARG145 3.5 9.8 1.0
CB X:THR142 3.5 10.7 1.0
CA X:THR142 3.6 10.1 1.0
O X:THR142 3.6 10.2 1.0
O X:HOH1036 3.7 45.6 1.0
CB X:ASN144 3.8 11.9 1.0
CA X:ASN144 3.8 11.7 1.0
CA X:ARG145 3.9 9.9 1.0
C X:ASN144 3.9 10.7 1.0
N X:PRO143 4.0 10.4 1.0
C X:PRO143 4.3 10.9 1.0
CG2 X:THR142 4.3 10.9 1.0
O X:HOH955 4.4 21.8 1.0
CD X:PRO143 4.6 9.5 1.0
OG1 X:THR142 4.6 10.6 1.0
CA X:PRO143 4.7 10.1 1.0
CG X:ASN144 4.8 17.6 1.0
O X:HOH962 4.8 21.2 1.0
N X:ALA146 4.9 10.2 1.0
CG X:ARG145 4.9 13.3 1.0
C X:ARG145 5.0 10.1 1.0

Chlorine binding site 2 out of 2 in 2oe9

Go back to Chlorine Binding Sites List in 2oe9
Chlorine binding site 2 out of 2 in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High-Pressure Structure of Pseudo-Wt T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl178

b:43.4
occ:0.50
O X:HOH941 2.9 13.8 1.0
O X:HOH927 3.2 29.4 1.0
O X:HOH911 3.3 24.2 1.0
CE1 X:HIS31 3.8 12.6 1.0
CB X:ALA49 3.8 14.9 1.0
NE2 X:HIS31 3.9 10.9 1.0
O X:HOH969 4.1 45.1 1.0
CA X:ALA49 4.2 15.4 1.0
O X:HOH994 4.3 31.7 1.0
CD2 X:LEU66 4.6 12.7 1.0
NE2 X:GLN69 4.6 13.9 1.0
O X:ALA49 4.8 15.9 1.0
ND1 X:HIS31 5.0 9.7 1.0

Reference:

M.D.Collins, M.L.Quillin, G.Hummer, B.W.Matthews, S.M.Gruner. Structural Rigidity of A Large Cavity-Containing Protein Revealed By High-Pressure Crystallography. J.Mol.Biol. V. 367 752 2007.
ISSN: ISSN 0022-2836
PubMed: 17292912
DOI: 10.1016/J.JMB.2006.12.021
Page generated: Sat Jul 20 09:30:44 2024

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