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Chlorine in PDB 5v0r: Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99

Protein crystallography data

The structure of Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99, PDB code: 5v0r was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.62 / 1.55
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 52.360, 85.240, 33.850, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 19.1

Other elements in 5v0r:

The structure of Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99 (pdb code 5v0r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99, PDB code: 5v0r:

Chlorine binding site 1 out of 1 in 5v0r

Go back to Chlorine Binding Sites List in 5v0r
Chlorine binding site 1 out of 1 in the Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:14.8
occ:0.85
O A:HOH509 2.9 21.2 0.6
N A:GLU72 3.2 12.3 1.0
O A:HOH316 3.4 16.9 0.5
O A:HOH509 3.5 19.1 0.4
CA A:PRO71 3.7 11.6 1.0
CG A:GLU72 3.8 36.3 1.0
CB A:GLU72 3.9 15.5 1.0
C A:PRO71 4.0 11.6 1.0
CB A:PRO71 4.1 12.5 1.0
O A:HOH316 4.1 18.9 0.6
CA A:GLU72 4.2 12.6 1.0
CD A:GLU72 4.5 38.4 1.0
O A:PHE70 4.9 16.5 1.0
O A:HOH476 4.9 42.1 1.0
N A:PRO71 4.9 11.7 1.0
OE2 A:GLU72 5.0 34.0 1.0

Reference:

R.M.Irwin, S.J.Mayclin, D.D.Lorimer, T.E.Edwards. Crystal Structure of Ubiquitin-Conjugating Enzyme From Naegleria Fowleri with Modified CYS99 To Be Published.
Page generated: Fri Jul 26 18:30:49 2024

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