Chlorine in PDB 5v1m: Structure of Human USB1 with Uridine 5'-Monophosphate

The structure of Structure of Human USB1 with Uridine 5'-Monophosphate, PDB code: 5v1m was solved by E.J.Montemayor, A.L.Didychuk, S.E.Butcher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.59 / 1.47
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	42.512, 53.219, 46.638, 90.00, 107.04, 90.00
R / Rfree (%)	15.9 / 19.4

The binding sites of Chlorine atom in the Structure of Human USB1 with Uridine 5'-Monophosphate (pdb code 5v1m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Human USB1 with Uridine 5'-Monophosphate, PDB code: 5v1m:

Chlorine binding site 1 out of 1 in the Structure of Human USB1 with Uridine 5'-Monophosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Human USB1 with Uridine 5'-Monophosphate within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl301 b:20.9 occ:1.00 HH21 A:ARG112 2.5 29.6 1.0 H A:ARG112 2.7 25.7 1.0 HG2 A:ARG112 2.9 26.4 1.0 HD2 A:PRO111 3.0 29.4 1.0 HB3 A:ARG112 3.0 26.1 1.0 O A:HOH541 3.3 35.2 1.0 NH2 A:ARG112 3.3 24.7 1.0 HD3 A:ARG112 3.3 27.5 1.0 HG13 A:VAL110 3.4 29.4 1.0 N A:ARG112 3.5 21.4 1.0 CG A:ARG112 3.5 22.0 1.0 HH22 A:ARG112 3.6 29.6 1.0 CB A:ARG112 3.6 21.8 1.0 CD A:PRO111 3.7 24.5 1.0 HA A:VAL110 3.7 29.2 1.0 HB2 A:PRO111 3.7 29.5 1.0 N A:PRO111 3.8 23.1 1.0 HG12 A:VAL110 3.8 29.4 1.0 CD A:ARG112 3.9 22.9 1.0 CG1 A:VAL110 4.0 24.5 1.0 CA A:ARG112 4.2 21.2 1.0 C A:VAL110 4.2 23.1 1.0 HG2 A:PRO111 4.3 29.2 1.0 CB A:PRO111 4.3 24.6 1.0 C A:PRO111 4.3 23.4 1.0 CA A:PRO111 4.3 23.2 1.0 CZ A:ARG112 4.4 24.9 1.0 CG A:PRO111 4.4 24.3 1.0 HG3 A:ARG112 4.4 26.4 1.0 CA A:VAL110 4.4 24.3 1.0 HB2 A:ARG112 4.4 26.1 1.0 HD3 A:PRO111 4.5 29.4 1.0 NE A:ARG112 4.6 23.8 1.0 HD2 A:ARG112 4.7 27.5 1.0 HG11 A:VAL110 4.7 29.4 1.0 O A:HOH516 4.8 50.1 1.0 HA A:ARG112 4.8 25.4 1.0 CB A:VAL110 4.9 24.5 1.0 O A:VAL110 5.0 21.5 1.0

A.L.Didychuk, E.J.Montemayor, T.J.Carrocci, A.T.Delaitsch, S.E.Lucarelli, W.M.Westler, D.A.Brow, A.A.Hoskins, S.E.Butcher. USB1 Controls U6 Snrnp Assembly Through Evolutionarily Divergent Cyclic Phosphodiesterase Activities. Nat Commun V. 8 497 2017.
ISSN: ESSN 2041-1723
PubMed: 28887445
DOI: 10.1038/S41467-017-00484-W