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Chlorine in PDB 7ln8: X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3

Enzymatic activity of X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3

All present enzymatic activity of X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3:
3.2.1.17;

Protein crystallography data

The structure of X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3, PDB code: 7ln8 was solved by F.Yabukarski, T.Doukov, D.Herschlag, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.61 / 1.52
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.397, 77.397, 37.205, 90, 90, 90
R / Rfree (%) 13.9 / 20

Other elements in 7ln8:

The structure of X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3 also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3 (pdb code 7ln8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3, PDB code: 7ln8:

Chlorine binding site 1 out of 1 in 7ln8

Go back to Chlorine Binding Sites List in 7ln8
Chlorine binding site 1 out of 1 in the X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:43.0
occ:1.00
 HH A:TYR23 2.2 24.0 1.0
OH A:TYR23 2.9 20.0 1.0
HE2 A:TYR23 3.1 21.0 1.0
HA3 A:GLY104 3.3 22.9 1.0
O A:HOH327 3.5 28.2 0.5
CZ A:TYR23 3.6 18.4 1.0
CE2 A:TYR23 3.6 17.5 1.0
O A:HOH359 3.8 31.1 1.0
HA2 A:GLY104 4.0 22.9 1.0
CA A:GLY104 4.0 19.1 1.0
O A:ARG21 4.6 27.8 1.0
N A:GLY104 4.6 21.7 1.0
H A:MET105 4.6 21.7 1.0
HB3 A:ARG21 4.8 40.0 1.0
H A:GLY104 4.8 26.0 0.7
CE1 A:TYR23 4.8 19.6 1.0
CD2 A:TYR23 4.8 18.0 1.0
H A:GLY104 4.9 26.0 0.3
O A:HOH327 4.9 25.4 0.5

Reference:

F.Yabukarski, T.Doukov, D.A.Mokhtari, S.Du, D.Herschlag. Evaluating the Impact of X-Ray Damage on Conformational Heterogeneity in Room-Temperature (277 K) and Cryo-Cooled Protein Crystals. Acta Crystallogr D Struct V. 78 945 2022BIOL.
ISSN: ISSN 2059-7983
PubMed: 35916220
DOI: 10.1107/S2059798322005939
Page generated: Sun Jul 13 03:47:32 2025

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