Chlorine in PDB 8d1t: Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab

Enzymatic activity of Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab

All present enzymatic activity of Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab:
3.4.19.12;

Protein crystallography data

The structure of Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab, PDB code: 8d1t was solved by X.Song, J.Butler, C.Li, K.Zhang, D.Zhang, Y.Hao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	40.70 / 2.94
*Space group*	P 1 2₁ 1
*Cell size a, b, c (Å), α, β, γ (°)*	41.879, 71.721, 148.63, 90, 93.98, 90
*R / R_free (%)*	23.6 / 29.4

Other elements in 8d1t:

The structure of Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab (pdb code 8d1t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab, PDB code: 8d1t:

Chlorine binding site 1 out of 1 in 8d1t

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Chlorine Binding Sites List in 8d1t

Chlorine binding site 1 out of 1 in the Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl601 b:75.8 occ:1.00	CL01	A:PXW601	0.0	75.8	1.0
	C02	A:PXW601	1.7	66.0	1.0
	C03	A:PXW601	2.6	56.9	1.0
	C18	A:PXW601	2.7	51.9	1.0
	O38	A:PXW601	3.0	41.4	1.0
	CE	A:MET448	3.1	98.8	1.0
	C19	A:PXW601	3.2	44.5	1.0
	NE2	A:HIS444	3.3	52.8	1.0
	CE1	A:HIS444	3.7	55.7	1.0
	C04	A:PXW601	3.9	59.8	1.0
	C17	A:PXW601	4.0	43.7	1.0
	CA	A:GLY451	4.2	68.6	1.0
	O	A:ASP447	4.2	85.1	1.0
	C	A:ASP447	4.4	89.8	1.0
	C16	A:PXW601	4.4	46.5	1.0
	N20	A:PXW601	4.4	46.7	1.0
	CD2	A:HIS444	4.5	56.9	1.0
	N	A:MET448	4.6	93.0	1.0
	CA	A:MET448	4.6	86.5	1.0
	SD	A:MET448	4.7	121.5	1.0
	N	A:GLY451	4.8	85.2	1.0
	C	A:GLY451	4.9	63.9	1.0
	ND1	A:HIS444	5.0	61.3	1.0
	C05	A:PXW601	5.0	69.4	1.0

Reference:

X.Song, J.Butler, C.Li, K.Zhang, D.Zhang, Y.Hao. Tbd To Be Published.

Page generated: Sun Jul 13 10:31:14 2025

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