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Chlorine in PDB 188l: Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity

Enzymatic activity of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity

All present enzymatic activity of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity:
3.2.1.17;

Protein crystallography data

The structure of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity, PDB code: 188l was solved by A.Morton, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.800, 60.800, 96.700, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity (pdb code 188l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity, PDB code: 188l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 188l

Go back to Chlorine Binding Sites List in 188l
Chlorine binding site 1 out of 2 in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:24.8
occ:1.00
O A:HOH209 2.9 30.7 1.0
O A:HOH291 3.0 68.8 1.0
N A:ASN144 3.3 9.7 1.0
N A:ARG145 3.4 5.7 1.0
C A:THR142 3.6 14.3 1.0
CA A:THR142 3.6 6.9 1.0
CB A:THR142 3.7 17.6 1.0
CB A:ASN144 3.8 11.0 1.0
CA A:ASN144 3.8 10.3 1.0
N A:PRO143 3.9 14.2 1.0
O A:THR142 3.9 12.8 1.0
CB A:ARG145 4.0 11.4 1.0
C A:ASN144 4.1 13.0 1.0
CD A:PRO143 4.2 13.0 1.0
C A:PRO143 4.2 21.3 1.0
CA A:ARG145 4.3 6.4 1.0
CG2 A:THR142 4.4 10.2 1.0
ND2 A:ASN144 4.6 27.8 1.0
CG A:ASN144 4.6 23.0 1.0
CA A:PRO143 4.6 7.3 1.0
O A:HOH230 4.9 37.6 1.0
OG1 A:THR142 4.9 12.4 1.0

Chlorine binding site 2 out of 2 in 188l

Go back to Chlorine Binding Sites List in 188l
Chlorine binding site 2 out of 2 in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:32.1
occ:0.50
O A:HOH215 3.0 12.4 1.0
O A:HOH182 3.5 20.5 1.0
O A:HOH200 3.6 32.4 1.0
O A:HOH246 3.6 44.8 1.0
CE1 A:HIS31 4.0 6.2 1.0
CB A:ALA49 4.1 12.3 1.0
NE2 A:HIS31 4.2 9.9 1.0
O A:HOH282 4.3 30.6 1.0
NE2 A:GLN69 4.4 14.9 1.0
CA A:ALA49 4.5 29.7 1.0
O A:HOH202 4.5 55.7 1.0
CD2 A:LEU66 4.8 12.1 1.0

Reference:

A.Morton, B.W.Matthews. Specificity of Ligand Binding in A Buried Nonpolar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity. Biochemistry V. 34 8576 1995.
ISSN: ISSN 0006-2960
PubMed: 7612599
DOI: 10.1021/BI00027A007
Page generated: Fri Jul 19 20:53:53 2024

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