Atomistry » Chlorine » PDB 3ck2-3csw » 3cnv
Atomistry »
  Chlorine »
    PDB 3ck2-3csw »
      3cnv »

Chlorine in PDB 3cnv: Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica

Protein crystallography data

The structure of Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica, PDB code: 3cnv was solved by M.D.Zimmerman, X.Xu, H.Cui, E.V.Filippova, A.Savchenko, A.M.Edwards, A.Joachimiak, W.Minor, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 2.00
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 58.196, 58.071, 65.580, 82.36, 86.52, 68.31
R / Rfree (%) 16.4 / 21.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica (pdb code 3cnv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica, PDB code: 3cnv:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 3cnv

Go back to Chlorine Binding Sites List in 3cnv
Chlorine binding site 1 out of 5 in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1

b:16.7
occ:1.00
NH1 B:ARG119 3.1 22.9 1.0
O B:HOH306 3.2 17.6 1.0
CD B:ARG119 3.6 19.2 1.0
CG B:ARG119 3.9 16.1 1.0
CZ B:ARG119 4.2 22.4 1.0
NE B:ARG119 4.3 19.4 1.0
O B:ILE120 4.5 13.5 1.0

Chlorine binding site 2 out of 5 in 3cnv

Go back to Chlorine Binding Sites List in 3cnv
Chlorine binding site 2 out of 5 in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl2

b:17.6
occ:1.00
NH1 C:ARG119 3.2 20.9 1.0
CD C:ARG119 3.6 18.8 1.0
CG C:ARG119 4.0 17.3 1.0
CZ C:ARG119 4.2 22.7 1.0
NE C:ARG119 4.3 18.4 1.0
O C:ILE120 4.5 14.5 1.0

Chlorine binding site 3 out of 5 in 3cnv

Go back to Chlorine Binding Sites List in 3cnv
Chlorine binding site 3 out of 5 in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl3

b:28.2
occ:1.00
O B:HOH361 3.2 30.4 1.0
O D:HOH348 3.4 28.9 1.0
N D:ASN259 3.4 14.7 1.0
ND2 D:ASN259 3.4 17.9 1.0
N B:ASN259 3.5 14.8 1.0
ND2 B:ASN259 3.5 14.1 1.0
CB D:ASN259 3.7 17.4 1.0
CB B:ASN259 3.7 17.0 1.0
NH2 C:ARG104 4.0 22.4 1.0
NH2 A:ARG104 4.0 22.8 1.0
CG D:ASN259 4.1 18.0 1.0
O C:HOH314 4.1 28.8 1.0
CA D:ASN259 4.1 16.3 1.0
CG B:ASN259 4.1 14.8 1.0
CA B:ASN259 4.1 17.3 1.0
O B:HOH326 4.2 25.2 1.0
CA D:LEU258 4.3 15.6 1.0
C D:LEU258 4.3 14.4 1.0
CA B:LEU258 4.4 13.1 1.0
C B:LEU258 4.4 14.1 1.0
OXT D:ASN259 4.5 19.5 1.0
OXT B:ASN259 4.6 20.0 1.0
C D:ASN259 4.7 19.2 1.0
C B:ASN259 4.7 19.5 1.0
O D:SER257 4.9 14.3 1.0
O B:SER257 4.9 13.8 1.0
CB D:LEU258 5.0 15.4 1.0

Chlorine binding site 4 out of 5 in 3cnv

Go back to Chlorine Binding Sites List in 3cnv
Chlorine binding site 4 out of 5 in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl4

b:27.6
occ:1.00
O A:HOH372 3.1 33.9 1.0
ND2 A:ASN259 3.3 16.6 1.0
N A:ASN259 3.4 12.4 1.0
O C:HOH369 3.4 32.2 1.0
N C:ASN259 3.5 18.2 1.0
ND2 C:ASN259 3.5 19.8 1.0
CB A:ASN259 3.6 15.1 1.0
CB C:ASN259 3.7 21.1 1.0
O A:HOH317 3.8 26.3 1.0
NH2 B:ARG104 3.9 25.4 1.0
O C:HOH339 3.9 29.0 1.0
CG A:ASN259 4.0 16.5 1.0
NH2 D:ARG104 4.0 23.3 1.0
CA A:ASN259 4.1 14.7 1.0
CG C:ASN259 4.1 18.9 1.0
CA C:ASN259 4.1 20.3 1.0
CA A:LEU258 4.3 11.8 0.5
CA A:LEU258 4.3 11.7 0.5
C A:LEU258 4.4 11.8 1.0
CA C:LEU258 4.4 16.7 1.0
C C:LEU258 4.5 17.4 1.0
O A:ASN259 4.5 19.1 1.0
O C:ASN259 4.6 21.7 1.0
C A:ASN259 4.7 16.6 1.0
C C:ASN259 4.7 21.8 1.0
O A:SER257 4.9 10.0 1.0
CB A:LEU258 5.0 11.3 0.5
CB A:LEU258 5.0 11.0 0.5
O C:SER257 5.0 17.2 1.0

Chlorine binding site 5 out of 5 in 3cnv

Go back to Chlorine Binding Sites List in 3cnv
Chlorine binding site 5 out of 5 in the Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Ligand-Binding Domain of A Putative Gntr- Family Transcriptional Regulator From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl5

b:39.6
occ:1.00
N D:ILE120 3.1 14.9 1.0
CA D:ARG119 3.8 16.6 1.0
CG2 D:THR179 3.8 36.8 1.0
C D:ARG119 3.9 16.4 1.0
CG1 D:ILE120 4.1 17.1 1.0
CB D:ILE120 4.1 16.8 1.0
CA D:ILE120 4.1 15.5 1.0
CB D:THR179 4.2 36.0 1.0
O D:HOH371 4.4 41.9 1.0
CA D:THR179 4.4 35.9 1.0
O D:ILE120 4.5 14.5 1.0
O D:SER118 4.5 18.0 1.0
CB D:ARG119 4.5 18.6 1.0
CG D:ARG119 4.8 20.7 1.0
C D:ILE120 4.8 16.1 1.0
N D:ARG119 4.8 18.4 1.0
O D:HOH336 5.0 33.5 1.0

Reference:

M.D.Zimmerman, X.Xu, H.Cui, E.V.Filippova, A.Savchenko, A.M.Edwards, W.Minor. Structure of the Ligand-Binding Domain of A Putative Gntr-Family Transcriptional Regulator From Bordetella Bronchiseptica. To Be Published.
Page generated: Fri Jul 11 04:09:32 2025

Last articles

Cl in 3U33
Cl in 3U5L
Cl in 3U57
Cl in 3U5J
Cl in 3U4X
Cl in 3U4R
Cl in 3U4U
Cl in 3U1W
Cl in 3U4O
Cl in 3U4M
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy