Atomistry » Chlorine » PDB 3ue5-3unf » 3ui4
Atomistry »
  Chlorine »
    PDB 3ue5-3unf »
      3ui4 »

Chlorine in PDB 3ui4: 0.8 A Resolution Crystal Structure of Human Parvulin 14

Enzymatic activity of 0.8 A Resolution Crystal Structure of Human Parvulin 14

All present enzymatic activity of 0.8 A Resolution Crystal Structure of Human Parvulin 14:
5.2.1.8;

Protein crystallography data

The structure of 0.8 A Resolution Crystal Structure of Human Parvulin 14, PDB code: 3ui4 was solved by J.W.Mueller, N.M.Link, A.Matena, L.Hoppstock, A.Rueppel, P.Bayer, W.Blankenfeldt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.80 / 0.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.043, 46.966, 51.826, 90.00, 90.00, 90.00
R / Rfree (%) 9.5 / 9.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 0.8 A Resolution Crystal Structure of Human Parvulin 14 (pdb code 3ui4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 0.8 A Resolution Crystal Structure of Human Parvulin 14, PDB code: 3ui4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3ui4

Go back to Chlorine Binding Sites List in 3ui4
Chlorine binding site 1 out of 2 in the 0.8 A Resolution Crystal Structure of Human Parvulin 14


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 0.8 A Resolution Crystal Structure of Human Parvulin 14 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:9.5
occ:0.54
OD1 A:ASP107 2.2 7.5 0.7
CG A:ASP107 2.9 6.9 0.7
O A:HOH445 2.9 16.4 0.5
O A:HOH318 3.2 12.5 1.0
OD2 A:ASP107 3.3 9.5 0.7
HB2 A:ASP107 3.5 3.7 0.3
CB A:ASP107 4.0 6.1 0.7
HB3 A:ASP107 4.0 7.3 0.7
HB2 A:ASP107 4.1 7.3 0.7
CB A:ASP107 4.4 3.1 0.3
HB3 A:ASP107 4.5 3.7 0.3
HH22 A:ARG63 4.5 33.3 0.1
HH21 A:ARG63 4.6 33.3 0.1
OD2 A:ASP107 4.8 7.3 0.3
NH2 A:ARG63 4.9 27.8 0.1
O A:ASP107 5.0 3.6 0.3

Chlorine binding site 2 out of 2 in 3ui4

Go back to Chlorine Binding Sites List in 3ui4
Chlorine binding site 2 out of 2 in the 0.8 A Resolution Crystal Structure of Human Parvulin 14


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 0.8 A Resolution Crystal Structure of Human Parvulin 14 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:9.7
occ:0.57
H A:LYS119 2.2 6.2 0.3
H A:LYS119 2.3 6.2 0.7
HG3 A:LYS119 2.6 8.9 0.3
O A:HOH412 2.7 30.6 0.9
O A:HOH466 2.8 13.9 0.6
O A:HOH466 2.8 16.7 0.4
HA A:THR118 2.8 4.6 1.0
HB A:THR118 2.9 4.9 1.0
HG22 A:VAL91 3.0 8.7 1.0
HE2 A:LYS119 3.0 10.3 0.3
N A:LYS119 3.0 5.2 0.3
N A:LYS119 3.0 5.2 0.7
HG2 A:LYS119 3.1 8.4 0.7
HD2 A:PRO93 3.1 7.0 1.0
HG21 A:VAL91 3.2 8.7 1.0
HG2 A:PRO93 3.3 7.5 1.0
HE3 A:LYS119 3.4 10.3 0.3
CA A:THR118 3.4 3.8 1.0
CG2 A:VAL91 3.5 7.2 1.0
CG A:LYS119 3.5 7.4 0.3
HB3 A:LYS119 3.5 7.5 0.7
HD3 A:PRO93 3.5 7.0 1.0
CE A:LYS119 3.6 8.6 0.3
CB A:THR118 3.6 4.1 1.0
CD A:PRO93 3.6 5.8 1.0
C A:THR118 3.6 4.6 1.0
HB2 A:LYS119 3.7 7.1 0.3
CG A:PRO93 3.9 6.2 1.0
CG A:LYS119 3.9 7.0 0.7
HG23 A:VAL91 3.9 8.7 1.0
CB A:LYS119 3.9 6.0 0.3
CA A:LYS119 4.0 5.5 0.3
HE3 A:LYS119 4.0 9.9 0.7
CB A:LYS119 4.0 6.3 0.7
HG22 A:THR118 4.1 5.1 1.0
HG2 A:LYS119 4.1 8.9 0.3
CA A:LYS119 4.1 6.2 0.7
CD A:LYS119 4.2 8.5 0.3
HA A:LYS119 4.2 6.6 0.3
HG3 A:PRO93 4.4 7.5 1.0
CG2 A:THR118 4.4 4.3 1.0
HG13 A:VAL91 4.5 8.0 1.0
HE2 A:LYS119 4.5 9.9 0.7
HA A:LYS119 4.6 7.4 0.7
HG11 A:VAL91 4.6 8.0 1.0
HG3 A:LYS119 4.6 8.4 0.7
O A:HOH437 4.6 26.6 0.7
HD3 A:LYS119 4.6 10.2 0.3
CE A:LYS119 4.6 8.2 0.7
O A:HOH341 4.6 29.3 0.9
H A:GLY92 4.7 7.1 1.0
OG1 A:THR118 4.7 4.4 1.0
CB A:VAL91 4.7 6.0 1.0
CD A:LYS119 4.8 8.2 0.7
N A:THR118 4.8 3.6 1.0
CG1 A:VAL91 4.8 6.6 1.0
O A:THR118 4.8 5.1 1.0
HG21 A:THR118 4.9 5.1 1.0
O A:LYS117 4.9 4.8 1.0
HB3 A:LYS119 4.9 7.1 0.3
NZ A:LYS119 4.9 10.0 0.3
HB2 A:PRO93 4.9 6.1 1.0
HB2 A:LYS119 4.9 7.5 0.7
H A:PHE120 5.0 6.5 1.0
HD2 A:LYS119 5.0 10.2 0.3
HZ1 A:LYS119 5.0 12.0 0.3

Reference:

J.W.Mueller, N.M.Link, A.Matena, L.Hoppstock, A.Ruppel, P.Bayer, W.Blankenfeldt. Crystallographic Proof For An Extended Hydrogen-Bonding Network in Small Prolyl Isomerases. J.Am.Chem.Soc. V. 133 20096 2011.
ISSN: ISSN 0002-7863
PubMed: 22081960
DOI: 10.1021/JA2086195
Page generated: Sun Jul 21 06:07:59 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy