Chlorine in PDB 6oso: The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
Enzymatic activity of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
All present enzymatic activity of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution:
4.2.1.20;
Protein crystallography data
The structure of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution, PDB code: 6oso
was solved by
E.Hilario,
M.F.Dunn,
L.Mueller,
C.Chang,
L.Fan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.60 /
1.75
|
Space group
|
P 65 2 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
70.940,
70.940,
203.401,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
17.1 /
20.4
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
(pdb code 6oso). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution, PDB code: 6oso:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 6oso
Go back to
Chlorine Binding Sites List in 6oso
Chlorine binding site 1 out
of 6 in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl309
b:59.4
occ:1.00
|
O
|
A:HOH632
|
2.9
|
44.3
|
1.0
|
O
|
A:HOH557
|
3.1
|
28.0
|
1.0
|
N
|
A:ASP160
|
3.3
|
26.1
|
1.0
|
O
|
A:HOH673
|
3.5
|
52.4
|
1.0
|
CB
|
A:ASP159
|
3.6
|
28.8
|
1.0
|
CB
|
A:ASP160
|
3.8
|
26.7
|
1.0
|
CG
|
A:ASP160
|
3.9
|
28.2
|
1.0
|
OD2
|
A:ASP160
|
4.1
|
31.9
|
1.0
|
CA
|
A:ASP159
|
4.1
|
25.5
|
1.0
|
CA
|
A:ASP160
|
4.2
|
24.1
|
1.0
|
C
|
A:ASP159
|
4.2
|
24.2
|
1.0
|
OD1
|
A:ASP160
|
4.3
|
26.6
|
1.0
|
O
|
A:HOH477
|
4.4
|
50.7
|
1.0
|
CG
|
A:ASP159
|
4.5
|
34.2
|
1.0
|
O
|
A:HOH538
|
4.8
|
30.6
|
1.0
|
OD2
|
A:ASP159
|
4.8
|
32.0
|
1.0
|
O
|
A:HOH424
|
4.9
|
30.8
|
1.0
|
N
|
A:ASP161
|
5.0
|
24.3
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 6oso
Go back to
Chlorine Binding Sites List in 6oso
Chlorine binding site 2 out
of 6 in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl310
b:75.1
occ:1.00
|
O
|
A:HOH513
|
3.6
|
47.6
|
1.0
|
O
|
A:PHE72
|
3.9
|
27.1
|
1.0
|
O
|
A:HOH524
|
4.0
|
46.1
|
1.0
|
O
|
A:ALA73
|
4.1
|
33.3
|
1.0
|
O
|
A:HOH664
|
4.5
|
59.3
|
1.0
|
N
|
A:GLY75
|
4.5
|
29.2
|
1.0
|
CA
|
A:GLY75
|
4.5
|
28.5
|
1.0
|
O
|
A:HOH641
|
4.5
|
43.0
|
1.0
|
O
|
A:HOH606
|
4.6
|
47.8
|
1.0
|
C
|
A:ALA73
|
4.6
|
33.5
|
1.0
|
CA
|
A:ALA73
|
4.8
|
30.5
|
1.0
|
C
|
A:PHE72
|
4.9
|
31.2
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 6oso
Go back to
Chlorine Binding Sites List in 6oso
Chlorine binding site 3 out
of 6 in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl311
b:70.3
occ:1.00
|
O
|
A:HOH518
|
2.8
|
54.7
|
1.0
|
O
|
A:SER178
|
3.0
|
55.0
|
1.0
|
C
|
A:SER178
|
3.3
|
48.5
|
1.0
|
O
|
A:HOH710
|
3.5
|
58.4
|
1.0
|
CB
|
A:LEU193
|
4.3
|
31.8
|
1.0
|
CD2
|
A:LEU193
|
4.3
|
43.4
|
1.0
|
OG
|
A:SER178
|
4.5
|
41.1
|
1.0
|
CA
|
A:SER178
|
4.6
|
33.6
|
1.0
|
O
|
A:HOH627
|
4.6
|
52.9
|
1.0
|
CG
|
A:LEU193
|
4.9
|
39.5
|
1.0
|
O
|
A:HOH515
|
5.0
|
35.5
|
1.0
|
CB
|
A:SER178
|
5.0
|
34.9
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 6oso
Go back to
Chlorine Binding Sites List in 6oso
Chlorine binding site 4 out
of 6 in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl312
b:61.9
occ:1.00
|
O
|
A:HOH609
|
2.7
|
38.5
|
1.0
|
O
|
A:HOH496
|
2.7
|
33.9
|
1.0
|
O
|
A:HOH505
|
3.0
|
21.4
|
1.0
|
O
|
A:HOH530
|
3.4
|
25.9
|
1.0
|
OG
|
A:SER235
|
3.6
|
40.2
|
1.0
|
N
|
A:SER235
|
4.0
|
25.2
|
1.0
|
N
|
A:GLY213
|
4.1
|
20.7
|
1.0
|
CA
|
A:GLY234
|
4.2
|
25.6
|
1.0
|
N
|
A:GLY234
|
4.3
|
22.4
|
1.0
|
CA
|
A:GLY213
|
4.3
|
23.4
|
1.0
|
CB
|
A:SER235
|
4.3
|
40.4
|
1.0
|
C
|
A:GLY234
|
4.4
|
21.0
|
1.0
|
N
|
A:ILE214
|
4.6
|
22.0
|
1.0
|
O
|
A:GLY211
|
4.7
|
21.4
|
1.0
|
O
|
A:HOH419
|
4.8
|
35.6
|
1.0
|
CA
|
A:SER235
|
4.8
|
26.1
|
1.0
|
C
|
A:GLY213
|
4.8
|
24.4
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 6oso
Go back to
Chlorine Binding Sites List in 6oso
Chlorine binding site 5 out
of 6 in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl313
b:56.8
occ:1.00
|
N
|
A:MET1
|
2.9
|
20.4
|
1.0
|
OD1
|
A:ASP124
|
2.9
|
18.6
|
1.0
|
O1
|
A:SO4308
|
2.9
|
19.7
|
0.8
|
N
|
A:ARG3
|
3.2
|
14.2
|
1.0
|
N
|
A:GLU2
|
3.2
|
20.3
|
1.0
|
O3
|
A:SO4308
|
3.2
|
29.5
|
0.8
|
O
|
A:HOH604
|
3.4
|
41.1
|
1.0
|
CA
|
A:MET1
|
3.4
|
16.9
|
1.0
|
CB
|
A:MET1
|
3.4
|
20.7
|
1.0
|
C
|
A:MET1
|
3.4
|
18.1
|
1.0
|
S
|
A:SO4308
|
3.7
|
29.0
|
0.8
|
CB
|
A:ARG3
|
3.7
|
16.0
|
1.0
|
CG
|
A:ARG3
|
3.8
|
15.5
|
1.0
|
CG
|
A:ASP124
|
3.9
|
17.5
|
1.0
|
O
|
A:HOH439
|
3.9
|
18.4
|
0.4
|
CA
|
A:ARG3
|
4.0
|
13.2
|
1.0
|
NH1
|
A:ARG3
|
4.0
|
21.4
|
1.0
|
C
|
A:GLU2
|
4.1
|
16.1
|
1.0
|
CA
|
A:GLU2
|
4.1
|
21.0
|
1.0
|
CG
|
A:MET1
|
4.3
|
29.2
|
1.0
|
O
|
A:MET1
|
4.3
|
19.6
|
1.0
|
CB
|
A:ASP124
|
4.3
|
15.6
|
1.0
|
CD
|
A:ARG3
|
4.5
|
16.7
|
1.0
|
O4
|
A:SO4308
|
4.7
|
20.6
|
0.8
|
O2
|
A:SO4308
|
4.7
|
34.5
|
0.8
|
N
|
A:TYR4
|
4.8
|
14.4
|
1.0
|
O
|
A:HOH417
|
4.8
|
44.9
|
1.0
|
OD2
|
A:ASP124
|
4.9
|
15.4
|
1.0
|
CZ
|
A:ARG3
|
4.9
|
18.2
|
1.0
|
CA
|
A:ASP124
|
4.9
|
13.0
|
1.0
|
C
|
A:ARG3
|
5.0
|
13.0
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 6oso
Go back to
Chlorine Binding Sites List in 6oso
Chlorine binding site 6 out
of 6 in the The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl314
b:45.7
occ:1.00
|
O
|
A:HOH659
|
2.8
|
35.5
|
1.0
|
O
|
A:HOH453
|
2.8
|
34.2
|
1.0
|
N
|
A:GLY172
|
3.0
|
18.0
|
1.0
|
CA
|
A:ARG171
|
3.6
|
17.8
|
1.0
|
C
|
A:ARG171
|
3.8
|
15.3
|
1.0
|
CB
|
A:ARG171
|
3.8
|
21.5
|
1.0
|
O
|
A:HOH618
|
3.9
|
51.8
|
1.0
|
CA
|
A:GLY172
|
3.9
|
13.8
|
1.0
|
O
|
A:HOH684
|
4.0
|
40.4
|
1.0
|
CD
|
A:ARG171
|
4.0
|
40.2
|
1.0
|
O
|
A:HOH523
|
4.1
|
19.1
|
1.0
|
CB
|
A:ALA206
|
4.4
|
19.2
|
1.0
|
O
|
A:HOH711
|
4.4
|
45.8
|
1.0
|
CG
|
A:ARG171
|
4.4
|
25.9
|
1.0
|
O2
|
A:SO4308
|
4.5
|
34.5
|
0.8
|
C
|
A:GLY172
|
4.6
|
15.9
|
1.0
|
O
|
A:GLY172
|
4.8
|
18.0
|
1.0
|
O
|
A:ARG171
|
5.0
|
15.8
|
1.0
|
N
|
A:ARG171
|
5.0
|
15.7
|
1.0
|
CA
|
A:ALA206
|
5.0
|
18.4
|
1.0
|
|
Reference:
E.Hilario,
M.F.Dunn,
L.Mueller,
C.Chang,
L.Fan.
The Crystal Structure of the Isolate Tryptophan Synthase Alpha-Chain From Salmonella Enterica Serovar Typhimurium at 1.75 Angstrom Resolution. To Be Published.
Page generated: Mon Jul 29 12:50:42 2024
|