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Chlorine in PDB 2q2f: Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein)

Protein crystallography data

The structure of Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein), PDB code: 2q2f was solved by J.R.Walker, R.Paramanathan, C.Butler-Cole, J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.20 / 1.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 119.666, 18.705, 37.992, 90.00, 93.36, 90.00
R / Rfree (%) 18.1 / 21.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein) (pdb code 2q2f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein), PDB code: 2q2f:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2q2f

Go back to Chlorine Binding Sites List in 2q2f
Chlorine binding site 1 out of 2 in the Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:61.5
occ:1.00
CG A:LYS99 3.6 44.9 1.0
CD2 A:HIS100 3.9 32.1 1.0
NE2 A:HIS100 3.9 43.8 1.0
CD A:LYS99 4.0 53.1 1.0
O A:LYS99 4.0 34.4 1.0
C A:LYS99 4.1 32.4 1.0
CG A:HIS100 4.2 35.0 1.0
CB A:LYS103 4.2 34.0 1.0
CE1 A:HIS100 4.3 38.1 1.0
N A:HIS100 4.3 32.1 1.0
CA A:HIS100 4.3 31.3 1.0
CB A:LYS99 4.4 38.1 1.0
ND1 A:HIS100 4.4 39.2 1.0
O A:HOH184 4.5 49.0 1.0
CG A:LYS103 4.5 40.0 1.0
CA A:LYS99 4.9 34.2 1.0
CB A:HIS100 4.9 34.3 1.0

Chlorine binding site 2 out of 2 in 2q2f

Go back to Chlorine Binding Sites List in 2q2f
Chlorine binding site 2 out of 2 in the Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Human Selenoprotein S (Vcp-Interacting Membrane Protein) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2

b:29.5
occ:1.00
CB A:ALA66 3.9 17.0 1.0
O A:LEU63 3.9 17.7 1.0
N A:ALA67 3.9 15.9 1.0
CB A:ALA67 4.1 16.8 1.0
CA A:ALA67 4.2 14.3 1.0
C A:ALA66 4.3 15.4 1.0
CD2 A:LEU63 4.4 20.5 1.0
C A:LEU63 4.8 18.0 1.0
CA A:ALA66 4.8 15.4 1.0
CA A:LEU63 4.8 16.7 1.0
O A:ALA66 5.0 17.8 1.0

Reference:

J.R.Walker, R.Paramanathan, C.Butler-Cole, J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon. Human Selenoprotein S (Vcp-Interacting Membrane Protein). To Be Published.
Page generated: Thu Jul 10 23:59:41 2025

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