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Chlorine in PDB 5dy9: Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
Protein crystallography data
The structure of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp, PDB code: 5dy9
was solved by
A.D.Nikulin,
A.O.Mikhailina,
N.V.Lekontseva,
V.A.Balobanov,
E.Y.Nikonova,
S.V.Tishchenko,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 50.00 / 1.60 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 60.636, 67.635, 91.165, 90.00, 90.95, 90.00 |
| R / Rfree (%) | 16.9 / 20.1 |
Other elements in 5dy9:
The structure of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp also contains other interesting chemical elements:
| Sodium | (Na) | 2 atoms |
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
(pdb code 5dy9). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp, PDB code: 5dy9:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;
In total 5 binding sites of Chlorine where determined in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp, PDB code: 5dy9:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;
Chlorine binding site 1 out of 5 in 5dy9
Go back to
Chlorine Binding Sites List in 5dy9
Chlorine binding site 1 out
of 5 in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp within 5.0Å range:
|
Chlorine binding site 2 out of 5 in 5dy9
Go back to
Chlorine Binding Sites List in 5dy9
Chlorine binding site 2 out
of 5 in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp within 5.0Å range:
|
Chlorine binding site 3 out of 5 in 5dy9
Go back to
Chlorine Binding Sites List in 5dy9
Chlorine binding site 3 out
of 5 in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp within 5.0Å range:
|
Chlorine binding site 4 out of 5 in 5dy9
Go back to
Chlorine Binding Sites List in 5dy9
Chlorine binding site 4 out
of 5 in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp within 5.0Å range:
|
Chlorine binding site 5 out of 5 in 5dy9
Go back to
Chlorine Binding Sites List in 5dy9
Chlorine binding site 5 out
of 5 in the Y68T Hfq From Methanococcus Jannaschii in Complex with Amp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Y68T Hfq From Methanococcus Jannaschii in Complex with Amp within 5.0Å range:
|
Reference:
A.Nikulin,
A.Mikhailina,
N.Lekontseva,
V.Balobanov,
E.Nikonova,
S.Tishchenko.
Characterization of Rna-Binding Properties of the Archaeal Hfq-Like Protein From Methanococcus Jannaschii. J. Biomol. Struct. Dyn. V. 35 1615 2017.
ISSN: ESSN 1538-0254
PubMed: 27187760
DOI: 10.1080/07391102.2016.1189849
Page generated: Sat Jul 12 01:27:51 2025
ISSN: ESSN 1538-0254
PubMed: 27187760
DOI: 10.1080/07391102.2016.1189849
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